Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4462 ATGGGCTTCTTCCGCCGACTTTTTGGCGCCAAAAAGAAACCCACCACACAAACCCCTGCCTCCAAACCGCCCAAGAGAAGATGGAGCTTCGCCAAACACCCTCCGCAACCACAACCCCCCTCCTCCGCCCTCAACCACCACTATGACCCCTCCTCCTCATCCTTAGACGCCAACAAGCATGCCATCGCCGTTGCAGCCGCCACTGCAGCCGTTGCAGAGGCCGCTCTCGCAGCCGCCCACGCCGCCGCCGAGGTTGTTCGCCTCACCAGTGCCGGAGCTCCCCCAACTACTCCCACCACTACCAGCAGGCCGAACGTTTCCTCCGCCGCCGTTAAGATACAATCGGCGTTTCGTGGTTACTTGGCAAGGAGGGCATTGAGAGCGCTAAAAGCATTGGTGAAGTTGCAAGCATTGGTTAGGGGCCACATCGTGAGAAAGCAAACCGCAGATATGCTAAGGCGCATGCAAACATTGGTGCGACTCCAGGCCCAGGCACGTGCCACTCGCGTGTTCTCACATACTAATACCACTATGCACTCTTTCAAGCCTTCACTTTCCCATTATTACCCTGTCCCTGAAGAATATAGTACTAAATTTGATGGATCTTCTATTTTGAAGAGATGTAGTTCCAATGCGAACTTCAGGAACAGCGAGTGGGAGAGAGGGGCACGGTTTGGTTCGAGTTGGTTAGAGCGATGGATGAAAGAAAGAGAAAACAGAGATGAGGATGAGGAGAAGATGAGTGACAAGATTCTGGAAGTAGACACATGGAAACCGCCACTAAGGTCAATGAAAGGAAAAGAAGAAGTATGTTCAAGAACCGCCGATAACAGCCCGCAAACATTATTGTCTTCGTCATCATCTAGGAGGCAGGGTGGACCCTTTACGCCCACAAGGAGCGAGTGCTCCTTCCATGGCTATGCAGGGCACCCCAACTACATGTCCAACACGCACTCTTCTAGAGCTAAGGTTAGATCGCAGAGTGCACCAAGACAGAGACTTGATTATGATAGATACGGATACGCTTGTTCCAATAATACTCTTCTTCACTATCATTCACATTTGAGGAGTAAAGTGTCAAGTAGTCGTTTCAATAGAATTGGGGTTACCAATTTAAGGTGA 1122 0.5089 MGFFRRLFGAKKKPTTQTPASKPPKRRWSFAKHPPQPQPPSSALNHHYDPSSSSLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSAGAPPTTPTTTSRPNVSSAAVKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQTADMLRRMQTLVRLQAQARATRVFSHTNTTMHSFKPSLSHYYPVPEEYSTKFDGSSILKRCSSNANFRNSEWERGARFGSSWLERWMKERENRDEDEEKMSDKILEVDTWKPPLRSMKGKEEVCSRTADNSPQTLLSSSSSRRQGGPFTPTRSECSFHGYAGHPNYMSNTHSSRAKVRSQSAPRQRLDYDRYGYACSNNTLLHYHSHLRSKVSSSRFNRIGVTNLR* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4462 373 PANTHER CALMODULIN-BINDING PROTEIN 263 341 - -
Amo19g4462 373 PANTHER CALMODULIN-BINDING PROTEIN 1 269 - -
Amo19g4462 373 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 106 151 IPR027417 -
Amo19g4462 373 Pfam IQ calmodulin-binding motif 108 127 IPR000048 GO:0005515
Amo19g4462 373 Pfam IQ calmodulin-binding motif 130 147 IPR000048 GO:0005515
Amo19g4462 373 MobiDBLite consensus disorder prediction 1 52 - -
Amo19g4462 373 Gene3D - 105 158 - -
Amo19g4462 373 SMART iq_5 105 127 IPR000048 GO:0005515
Amo19g4462 373 SMART iq_5 128 149 IPR000048 GO:0005515
Amo19g4462 373 MobiDBLite consensus disorder prediction 273 298 - -
Amo19g4462 373 Pfam Protein of unknown function (DUF4005) 273 337 IPR025064 -
Amo19g4462 373 ProSiteProfiles IQ motif profile. 107 134 IPR000048 GO:0005515
Amo19g4462 373 PANTHER IQ-DOMAIN 5-RELATED 263 341 - -
Amo19g4462 373 PANTHER IQ-DOMAIN 5-RELATED 1 269 - -
Amo19g4462 373 MobiDBLite consensus disorder prediction 265 301 - -
Amo19g4462 373 ProSiteProfiles IQ motif profile. 130 157 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4462 Amo-Chr19 161578065 161580957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4462 1 353 IQD Protein Family AT5G62070 48.964 6.04e-63 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4462 - - ahf:112711676 672.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4462 19 161578065 161580957 Amo19g4462 19 161578065 161580957 ECH