Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4436 ATGGAGGTTTCAGTTTCAGGGCTATGTGGTATTGTTGTTGCTGCGTTGGCATTATTTTTCATGTTAATGGTCTTGATTGTAACATATGCATGGTGGATTTCCCCAATCCAAACACATAATAAGCTTAAGAGATGTGGCTTTGGAGGCCCAACCCCATGCTTCCCACTTGGAAACATCCAACACATGAAAAATATTAGGGCTATTAACAATAATGATCTCATCACTCCTCTCACCCATGATATACACTCTCACGTTTCCCCCTACTTTTCCTCTTGGCAGAAATCTTTTGAATTCTTGAAGAAGATGTCGAAGGAGGTAGAAGCTAAGAGATGGGGGAAGCCAAGTGTGTTTAGAGATGACAGAGAGGCCATGTTTGGGACTGGGTTGGTCATGGTTGAAGGCAATGATTGGGTTCGCCATCGCCACATTGTTGCACCCGCATTCAATCCCATTCATCTCAAGCCCATGCTCACCATCATGCTTGCATCAACAAACAAAATGGTACAAGCATGGCTCTCTCAACTAAACTCCGCTTCCGCCACAATCGACGTTGAGAGGGACATTGTAGCCACCGCCGGAGACATCATAGCAAGAACCATTCTCGGCATTATGGATGATGATGACCACAACGCCACACAGGTCTTCCGAAAGTTGCGAGCTCTTCAAATGACTCTCTTCAACACCAACCGCTACGTTGGGGTTCCATTCGGCAAGTACTTCAACGTTAAGAAAACCCTAGAGGCCTACAAGTTAGGCAAAGAAATTGATGAGCTCTTGTTGTCTATCATTCAAGCTCGCATGAGTCACAGATCATCCAAATCGAAGAGCGACTTGTTGGGTTTGCTGCTTCAAGAAAATGGTGATGCGCTAACAATGAGGGAGCTTGTTGACGAATGCAAGACATTCTTCTTTGGCGGACATGAAACCACGGCGCTTTCTATCACCTGGACATTGCTGCTTCTGGCTATGCATCAGGATTGGCAGAACCAACTGAGAGATGAGATTCAACAGCTTCTTGCTCGCCACAACCACGTTATTGATCTCGCCATGCTTTCTGGTTTAACCAAGATTATGCATCAGATGAAGTGGGTGATGAATGAAGCTCTAAGGCTGTACCCTCCATCACCAAATGTGCAAAGGCAAGCAAGGGAAGACATTGAAGTGAAGGGTTTAATAGTGCCTAAAGGAACCAACATGTGGATCGATGTGGTGGCCATGCACCATGACCCGGAGCTATGGGGAGAGGACGCTAATGAGTTCAAGCCAGAGAGGTTCATGGAGGATGTGAATGGTGGATGCAAACACAAGATGGGTTACTTGCCATTTGGATTTGGAGGGAGAATGTGTGTTGGTAGGAACTTGACATTCATGGAGTACAAGATTGTGTTAACTCTACTTCTCTCTAACTTCTCTTTCAACATTTCTCCAACTTACCATCACTCACCATCTATCATGCTCTCTCTAAGGCCCACCCATGGACTCCCACTTATTCTTCAACCCCTTTAG 1506 0.4555 MEVSVSGLCGIVVAALALFFMLMVLIVTYAWWISPIQTHNKLKRCGFGGPTPCFPLGNIQHMKNIRAINNNDLITPLTHDIHSHVSPYFSSWQKSFEFLKKMSKEVEAKRWGKPSVFRDDREAMFGTGLVMVEGNDWVRHRHIVAPAFNPIHLKPMLTIMLASTNKMVQAWLSQLNSASATIDVERDIVATAGDIIARTILGIMDDDDHNATQVFRKLRALQMTLFNTNRYVGVPFGKYFNVKKTLEAYKLGKEIDELLLSIIQARMSHRSSKSKSDLLGLLLQENGDALTMRELVDECKTFFFGGHETTALSITWTLLLLAMHQDWQNQLRDEIQQLLARHNHVIDLAMLSGLTKIMHQMKWVMNEALRLYPPSPNVQRQAREDIEVKGLIVPKGTNMWIDVVAMHHDPELWGEDANEFKPERFMEDVNGGCKHKMGYLPFGFGGRMCVGRNLTFMEYKIVLTLLLSNFSFNISPTYHHSPSIMLSLRPTHGLPLILQPL* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4436 501 Pfam Cytochrome P450 107 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4436 501 Gene3D Cytochrome P450 31 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4436 501 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4436 501 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4436 501 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4436 501 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4436 501 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4436 501 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 7 96 - -
Amo19g4436 501 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 97 496 - -
Amo19g4436 501 PANTHER CYTOCHROME P450 FAMILY MEMBER 7 96 - -
Amo19g4436 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Amo19g4436 501 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4436 501 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4436 501 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4436 501 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4436 501 PANTHER CYTOCHROME P450 FAMILY MEMBER 97 496 - -
Amo19g4436 501 SUPERFAMILY Cytochrome P450 49 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4436 Amo-Chr19 161405745 161407765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4436 11 501 Cytochrome P450 AT5G52400 52.031 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4436 - - gmx:100802882 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4436 19 161405745 161407765 Amo19g4436 19 161405745 161407765 ECH
Amo19g4436 19 161405745 161407765 Amo09g2827 09 107328220 107330998 hybridization
Amo19g4436 19 161405745 161407765 Amo19g4436 19 161405745 161407765 PCT
Amo19g4436 19 161405745 161407765 Amo09g2827 09 107328220 107330998 PCT
Amo09g2827 09 107328220 107330998 Amo19g4436 19 161405745 161407765 PCT