Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4421 ATGCACAAGAAATGTTTCTGTTGTTTTCTATCTGAAGAAGAGCAAAGCAAAGCAAGGAATAATAAAGGAGAAAAGAATAAGAATAAGGATTATCCATGGGAAATCTACACATCGAAGGAGCTGCTTCGTGCAACAAACAATTTTCACCAAGATCACAAGATTGGAGAAGGTGGATTTGGAAGTGTTTATTGGGGTCGAACAAGTAAAGGCGTCGAGATTGCAGTGAAGCGGTTGAAAACGATGACTGCAAAAGCAGAGATGGAGTTCGCAGTTGAAGTGGAAGTACTTGGAAGGGTTAGGCATAAGAATCTGTTGGGTTTGAGAGGTTTCTACGCTGGAGGAGATGAAAGGTTAATTGTTTATGATTTCATGCCTAATCAAAGCTTGCTCACACATTTGCACGGTCACCTTTCTTCTAATTGTCTCTTAGATTGGCCTAAAAGAATCAACATAGCAATTGGTGCAGCTGAAGGTTTAGCGTATTTGCACCATGAGGCAAATCCTCACATCATACACAGAGACATAAAAGCAAGCAATGTTCTGTTAGACCTTGAATTCCAAGCCAAGGTAGCTGATTTCGGTTTCGCAAAGCTCATACCAGAGGGTGTGAGCCATCTCACAACAAGGGTTAAAGGGACACTCGGATATTTGGCACCGGAATATGCCATGTGGGGTAAAGTGTCGGAGAGTTGTGATGTTTACAGCTTTGGGATTCTTCTTTTGGAGATTGTTAGTGCCAAGAAACCAATTGAGAAGCTACCAGGTGGAGTGAAAAGGGACATTGTTCAATGGGTGACACCTTATTTCCAAAAGGGTGCGTTCAATCACATTGCGGATTCCAAGCTGAAGGGGAAGTTTGATTTGGATCAGTTGAAATCTGTGGTGATGATAGCTCTGAGATGCACCGATGGTAGCCCTGAGAAGAGGCCTAGCATGGCAGAGGTTGTGGATTGGCTTAAGGGTGCAGCTGGCAAGAGAAGAAGAGAGGTTACTCCTTCTCTAAGTTTGGGTAATGGTGATGATGAAGTGGATGACGATGATTACGGAGAGATTACACCATACCAATCCAAGTTGAAAATGGCAAGTACTGATAGTGATAGGCATAAGAGAAGATGA 1116 0.4283 MHKKCFCCFLSEEEQSKARNNKGEKNKNKDYPWEIYTSKELLRATNNFHQDHKIGEGGFGSVYWGRTSKGVEIAVKRLKTMTAKAEMEFAVEVEVLGRVRHKNLLGLRGFYAGGDERLIVYDFMPNQSLLTHLHGHLSSNCLLDWPKRINIAIGAAEGLAYLHHEANPHIIHRDIKASNVLLDLEFQAKVADFGFAKLIPEGVSHLTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIVSAKKPIEKLPGGVKRDIVQWVTPYFQKGAFNHIADSKLKGKFDLDQLKSVVMIALRCTDGSPEKRPSMAEVVDWLKGAAGKRRREVTPSLSLGNGDDEVDDDDYGEITPYQSKLKMASTDSDRHKRR* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4421 371 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 4 335 - -
Amo19g4421 371 ProSiteProfiles Protein kinase domain profile. 48 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4421 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Amo19g4421 371 MobiDBLite consensus disorder prediction 325 371 - -
Amo19g4421 371 PANTHER OS01G0253100 PROTEIN 4 335 IPR045271 GO:0004714|GO:0006468
Amo19g4421 371 SUPERFAMILY Protein kinase-like (PK-like) 30 332 IPR011009 -
Amo19g4421 371 CDD STKc_IRAK 54 321 - -
Amo19g4421 371 Gene3D Phosphorylase Kinase; domain 1 9 123 - -
Amo19g4421 371 ProSitePatterns Protein kinases ATP-binding region signature. 54 76 IPR017441 GO:0005524
Amo19g4421 371 Pfam Protein kinase domain 48 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4421 371 SMART serkin_6 48 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4421 371 Gene3D Transferase(Phosphotransferase) domain 1 124 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4421 Amo-Chr19 161285409 161287195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4421 19 342 Receptor kinase-like Gene Family AT5G45780 41.791 2.33e-81 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Amo19g4421 Pkinase 2.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4421 - - gmx:100817283 592.038