Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4418 ATGGCTAACAAGCTAACAATGGTTGGATACTACATTATTCTAATAACAAACTGTGTTCTCTTGAGCACTCTCTGCTTATCATCATCTGCAAATGCTAAATTTGCAAAGAAGACTTACATCATTCAAATGGATAAGTCTGCAAAGCCAAACACATTTTCCAACCACCTTGAATGGTATTCATCAAAAGTGAAATCAGTTCTGTCCAAATCTGATGATGAGATACGCAACGAAGAAGAAGAGAGGATCATATACACTTACGAAACAGCTTTTCATGGCGTGGCTGCAAAGTTGACCGAAGAAGAAGCAGAGAAGCTAGAATCAGAAGAAGGAGTAGTGGCCATATTCCCAGAAACAAAGTACACGCTTCACACAACAAGAAGCCCAGGTTTTCTGGGCCTTGAACCATTGGATAGCACCGACAAAATCTGGTCAGAGAATGTTGCTGATCATGATGTCATCGTTGGAGTGCTGGACACAGGGATTTGGCCCGAGAGTGAAAGCTTCAACGACACAGGAATGAAACCGGTTCCTTCTCACTGGAGAGGAGCCTGCGAAATCGGAAGAGGATTCAGGAAGAGCAACTGCAACAAGAAGATTGTGGGAGCAAGAATATTCTACCGCGGGTATGAATCCGCAACAGGAAGAATGGACGAGAAAGCAGAATACAAATCACCAAGAGATCAAGATGGTCATGGAACTCACACTGCAGCAACAGTTGCAGGTTCACCGGTGCGCGGTGCTAACCTTCTCGGCTACGCTTACGGCACCGCGAGAGGGATGGCACCGTCGGCAAGAATCGCAGCGTATAAAGTTTGCTGGACCGGTGGATGCTTCAGTTCTGATATTCTCTCAGCCGTGGACAGAGCCGTGGCTGACGGAGTAAACGTTCTATCAATCTCTTTAGGTGGCGGAGTCTCCTCTTACGACCGAGATTCTTTATCCGTTGCCGCATTTGGAGCAATGGAGCACGGAGTTTTTGTTTCTTGCTCTGCCGGAAATGCAGGCCCTGACCCTGTGAGTCTGACCAATGTTTCACCATGGATCACCACCGTTGGAGCAAGCACAATGGACAGAGATTTTCCTGCTGAAGTGAGGCTTGGAAATGGAAGAACCGTAGCCGGTTCTTCACTCTACAAAGGAACAAGCGTTCTCTCGTTGAAGAAGCAGTATCCTCTGGTGTACTTAGGAGGCAACTCATCATCCCTGGATCCAAGATCTTTGTGCTTGGAAGGAACCTTGGATCCTAAAATAGTGAAAGGGAAGATTGTGATCTGTGACAGGGGAATCAGTGCAAGAGTTCAGAAGGGGCAAGTAGTGGCATCAGCAGGAGGAGTTGGAATGATTCTAACAAACACCGCCACCAACGGCGAAGAGCTTGTTGCCGACTGCCACCTCCTTCCGGCGGTGGCAATCGGAGAGACAGAAGGAAAGGAGCTCAAACGTTACGTGTTAACAAAAAAGAACGGAAAAGCAACTGCAACTCTGGCTTTCATGAACACAAGATTGGGAATTAGGCCTTCCCCTGTGGTGGCTGCGTTTTCTTCAAGAGGGCCTAATTTCTTAACACTTGAGATTCTGAAACCTGATCTGGTGGCTCCCGGTGTCAACATTCTTGCCGCGTGGAGCGGCCTCATTGGTCCATCTAGCTTGCAGACAGATCACAGAAGGGTCAAGTTCAACATACTCTCCGGAACTTCAATGTCATGCCCTCATGTTAGTGGTGTTGCCGCATTCATCAAGTCTAAGCATCCTCAATGGAGTCCTGCAGCTATCAAATCTGCACTCATGACAACCGCTTATGTTCATGACAACACAATCAAGCCTCTCAAAGATGCATCTAGTGCTGTTCCTTCCACTCCTTATGATCATGGTGCTGGCCACATTAATCCAAGAAAGGCTCTTGACCCTGGCTTAGTCTATGACATTAGTCCACAGGATTACTTCGAATTCTTGTGCACACAGAAGCTAACTACACCGCAGTTGAGAGTTTTTGGCAAATACTCTAACAGAACTTGCAAGCACTATCTTTCAACTGCTGCTGACTTGAACTATCCAGCAATATCTGTGCTGTTTCCTGAGAAAGCTTCTGTTTCTTCTTTGACTGTTCATAGAACTGTTACCAATGTAGGACCTGCTGTTTCCAAGTACCATGTGATGGTGTCACCATTCATAGGTGCTTCTGTGAAAGTTGAGCCTGATGTGTTGAATTTCACAACCAAGTATCAAAAATTGTCTTATAAGGTTACGTTTACTACAAGGTCTAGGCCTAAGGAACCCGAATTTGGAGGTCTGGTTTGGAAGGATGGTGTGCACAGGGTGAGAAGCCCCATTGTCATAACATATATGCCTCCAATATGA 2358 0.4627 MANKLTMVGYYIILITNCVLLSTLCLSSSANAKFAKKTYIIQMDKSAKPNTFSNHLEWYSSKVKSVLSKSDDEIRNEEEERIIYTYETAFHGVAAKLTEEEAEKLESEEGVVAIFPETKYTLHTTRSPGFLGLEPLDSTDKIWSENVADHDVIVGVLDTGIWPESESFNDTGMKPVPSHWRGACEIGRGFRKSNCNKKIVGARIFYRGYESATGRMDEKAEYKSPRDQDGHGTHTAATVAGSPVRGANLLGYAYGTARGMAPSARIAAYKVCWTGGCFSSDILSAVDRAVADGVNVLSISLGGGVSSYDRDSLSVAAFGAMEHGVFVSCSAGNAGPDPVSLTNVSPWITTVGASTMDRDFPAEVRLGNGRTVAGSSLYKGTSVLSLKKQYPLVYLGGNSSSLDPRSLCLEGTLDPKIVKGKIVICDRGISARVQKGQVVASAGGVGMILTNTATNGEELVADCHLLPAVAIGETEGKELKRYVLTKKNGKATATLAFMNTRLGIRPSPVVAAFSSRGPNFLTLEILKPDLVAPGVNILAAWSGLIGPSSLQTDHRRVKFNILSGTSMSCPHVSGVAAFIKSKHPQWSPAAIKSALMTTAYVHDNTIKPLKDASSAVPSTPYDHGAGHINPRKALDPGLVYDISPQDYFEFLCTQKLTTPQLRVFGKYSNRTCKHYLSTAADLNYPAISVLFPEKASVSSLTVHRTVTNVGPAVSKYHVMVSPFIGASVKVEPDVLNFTTKYQKLSYKVTFTTRSRPKEPEFGGLVWKDGVHRVRSPIVITYMPPI* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4418 785 MobiDBLite consensus disorder prediction 217 238 - -
Amo19g4418 785 SUPERFAMILY Subtilisin-like 122 638 IPR036852 GO:0004252|GO:0006508
Amo19g4418 785 CDD PA_subtilisin_like 364 492 - -
Amo19g4418 785 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 780 IPR045051 -
Amo19g4418 785 SUPERFAMILY Protease propeptides/inhibitors 37 117 - -
Amo19g4418 785 Gene3D - 651 782 - -
Amo19g4418 785 ProSiteProfiles Serine proteases, subtilase domain profile. 130 634 - -
Amo19g4418 785 Pfam Fibronectin type-III domain 681 779 IPR041469 -
Amo19g4418 785 ProSitePatterns Serine proteases, subtilase family, serine active site. 564 574 IPR023828 -
Amo19g4418 785 CDD Peptidases_S8_3 120 600 IPR034197 -
Amo19g4418 785 PRINTS Subtilisin serine protease family (S8) signature 149 168 IPR015500 -
Amo19g4418 785 PRINTS Subtilisin serine protease family (S8) signature 563 579 IPR015500 -
Amo19g4418 785 PRINTS Subtilisin serine protease family (S8) signature 227 240 IPR015500 -
Amo19g4418 785 Gene3D Peptidase S8/S53 domain 151 647 IPR036852 GO:0004252|GO:0006508
Amo19g4418 785 Pfam Subtilase family 150 605 IPR000209 GO:0006508|GO:0008236
Amo19g4418 785 Pfam PA domain 389 479 IPR003137 -
Amo19g4418 785 Pfam Peptidase inhibitor I9 38 123 IPR010259 -
Amo19g4418 785 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 123 IPR037045 -
Amo19g4418 785 Gene3D - 357 503 - -
Amo19g4418 785 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 26 780 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4418 Amo-Chr19 161225178 161227837 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4418 1 785 Subtilisin-like Serine Gene Family AT5G51750 71.229 0.0 1148