Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4402 ATGGAGCAACACTGTTGTTACTGCTTCGACTGCCTCCAGCTTCGAATCAACTCCGATTTCTCCGACCAACTCTTGTTCAATTATGGCATTTCCTCTTCCCCTTTCCCTTTCGGTTCTTCCGCCGTTGTCCAAATTTCTGGTACAGCTGGCAGTGAAGCTTCATCCGGTCAATTTATATTGCAGTACACGCGCTCTCGTCACAGCAATTGTTTCTCCAATTATGTAAATGAGTATATTTTGGATAGTAATGAAGGAACTAGGAGTAGTGATCCTGATACTGGCACAAGCCAATGTGGTCCTAATGTGCAAAATGGTGGAATGGCTTCATCATCAGATGCTGAAACCAAAAGAGCATCTCCCATGAGCACAAGTTGTAGTCATTCTGGAAAGTTTTCTTGCTTCAGGATAATCACTTCACTGGCCCCCATTGCCCGAGTGGGAGTTTCTTCATTTTCTACCATCCAAGAGGTTGCCACTGATTTCTTGTCTGGGTTAATGGAAGATCATGTGTTGGATTCACTTGATATCTGGATTGAAGGGAAAGCTTCAGGAAGGGACAGCACAAATTTCCTTAGCTTAATTGGCTTGCCATCGTTTCAGGAGGACACATTTCCCGGCTCCTTGAGGCATCCAAACATAGCCCCTGTCCTTGCATTTTTTAAATCATCTGATCATGTTAATATGGTGCTTCCAAAGACTCCATACAATCTCGAGAATATTCTGCATTTTAACCCCAGTGCCTTTAAGTCTGACTGGCATAGAGGATTTCTTATATATCAGCTGCTCTCAGCATTGGTATACCTTCACGGTCTAGGGGTTTCTCATGGCAACGTATGCCCATCCAATATCATGTTGACTGACTCATTATGGTCTTGGCTGAGATTATGGAATGAACCTACATTGGAATTTAATTCAACTTTACAAAAGAGTGAAGACGTTAATTCAAGCCCTGCAAAAATTAGTTGTTACAATAGTGGTTGCCATTATAATGGTCTTTATGCTGATTTAAAGCTTTCACCATCAATAGATTGGCATTCTAGCTTCCATCATTGGTGGAAAGGAGAGTTGAGTAATTTTGAATATTTACTTATCTTAAACAGATTAGCAGGCAGAAGGTGGGGAGACCATACATTTCATCCAGTAATGCCTTGGGTAATTGATTTTAGCACCAAACCTGATGATAATTGTGATGCAGGATGGCGAGACTTGAGCAAGAGCAAATGGCGCTTAGCGAAAGGTGATGAACAGTTGGATTTCACCTATTCAACATCTGAAATACCTCATCATGTGTCAGATGAATGCCTCTCTGAACTGGCTGTGTGCAGTTATAAAGCAAGAAGGCTGCCTTTGAGTGTACTCCGAATGGCTGTTCGTTCAGTTTATGAACCTAACGAATATCCTTCCACAATGCAGAGGCTCTATCAATGGACCCCAGATGAGTGCATTCCAGAGTTCTATTGTGATGCCCAAATATTTAGATCAATTCATGATGGAATGGCTGATTTGGCTGTACCTTCTTGGGCTGAGACTCCAGAGGATTTCATTAAATTGCATCGTTGGGCATTAGAAAGTAATAGAGTTTCTTTTCAACTCCATCAATGGATAGATATAACCTTTGGGTACAAAATGTCTGGGCAAGCAGCTATTGCTGCTAAGAATGTTATGCTTCCTATATCAGAACCTACGATGCCAAGGTCAACAGGACGTCGTCAGCTCTTTACACGACCTCACCCCATTCGTCTTGCCACTTCAACCGCACGTCGTTATGCCACCAATAAATATGCTAAAGTTTGGAGCCAGGAAAATGAAATACTGCGAGAGACATCTCTCCTGTCTGATGCTGCTTATCTACAAGAACTAGAGCAAGCATCTGCATTTTCTGAGCATGCTAGGCATTTGAATTCTTGTTATCAGTGTCCATTAAATCAAACACAGGGAGATCCAACAAGGCAGTCAATTAACAAAAGCATATGCAAATTATCTTTGCCTGACAGAAACTACTTGCTGCCATATAAAATGAATCTGATTTCTTTGATTCAGCATATGAAGGAAGAAGATGACAGCTCGTCAGGATATCCAGACTATTTGCTTTGGAGGGAAAAATTGTCTTGCTCAAAAGTTAGCTCTGAAGATGTTGCTAGGGACATTTTTTCTGTTGGTTGTCTCTTAGCAGAACTTCATCTTTCTATTCCCCTCTTTGATTCAACCTCATATGCGATGTACTTGGAAGATGGGACCTTACCAGGATCTCTTTGTGAACTTCCTCCTTATGTTAGGTTACTTGTTGAAGCATGCATACAAAAGGATTGGATGAGGAGGCCTTCAGCCAAATTTCTTCTGGAATCACCTTATTTTCCAAAGACAATAAAGTCCTCCTACACGTTTCTTGCCCCACTTCAGCTTGTTGCTAAGGATGAGACCCGCCTTCGATATGCCACAAATCTTGCAAAGAAGGGAGCTCTCAGAGAAATGGGCTCATTCGCAGCTGAAATGTGCGCTACTTATTGCTTACCACTTGTATTGAGTACTGTGAATGATGCTGAAGCTGAATGGGCATATATACTACTGAAAGAATTTATGAGATGCTTAAAAGAGAAAGCAGTGAAGAAATTAATCTTGCCAACCATACAGAAAATTTTGCAGACAACAGGTCATTTACATTTAAAAGTTTCCCTTTTACAAGATTCATTTGTACGTGAAATATGGAACCGAGTTGGTAAACAAGTATACCTGGAAACTATTCACCCATTGGTTTTATCAAACTTGTATAATTCTCTGGATAAAAGTTCAGCTGCATCTGCATCTGTCCTTCTAGTTGGTTCTAGTGAGGAGCTTGGAGTACCTATTACCATCCACCAGACAATCTTGCCTCTTTTTTACTGTTTTGGTAAAGGACTTTGTGCTGATGGCATTGATGTGCTGGTCAGACTTGGTGGCATTTTTGGAGAATCCTTTATTGTGAAACAGATGCTACCATTACTAAAAAATGTTGTTCGCTCGTTCGTTGATATGTCAAGCATGAACAAGCCTGATCCTGTCCAGAGTTGGAGTGCTTTAGCACTTATTGATTGCGTGATGACATTAGATGGCCTTTTACCTTACTTGACAGAAGAGATTATTGTAAAGGAGCTGTTTGAAGACCAAAATTGTGTACTCATCAGGGTTCTTATGCAGAAACATATGGACATTGCCGTGCTTCAGGTTCTTCAAATTACCCATTGGTTGCTGCTACTACTCTCTTTGCAATATGTCAGCGAATTGGGGCAGATTTGA 3273 0.4106 MEQHCCYCFDCLQLRINSDFSDQLLFNYGISSSPFPFGSSAVVQISGTAGSEASSGQFILQYTRSRHSNCFSNYVNEYILDSNEGTRSSDPDTGTSQCGPNVQNGGMASSSDAETKRASPMSTSCSHSGKFSCFRIITSLAPIARVGVSSFSTIQEVATDFLSGLMEDHVLDSLDIWIEGKASGRDSTNFLSLIGLPSFQEDTFPGSLRHPNIAPVLAFFKSSDHVNMVLPKTPYNLENILHFNPSAFKSDWHRGFLIYQLLSALVYLHGLGVSHGNVCPSNIMLTDSLWSWLRLWNEPTLEFNSTLQKSEDVNSSPAKISCYNSGCHYNGLYADLKLSPSIDWHSSFHHWWKGELSNFEYLLILNRLAGRRWGDHTFHPVMPWVIDFSTKPDDNCDAGWRDLSKSKWRLAKGDEQLDFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLRMAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDAQIFRSIHDGMADLAVPSWAETPEDFIKLHRWALESNRVSFQLHQWIDITFGYKMSGQAAIAAKNVMLPISEPTMPRSTGRRQLFTRPHPIRLATSTARRYATNKYAKVWSQENEILRETSLLSDAAYLQELEQASAFSEHARHLNSCYQCPLNQTQGDPTRQSINKSICKLSLPDRNYLLPYKMNLISLIQHMKEEDDSSSGYPDYLLWREKLSCSKVSSEDVARDIFSVGCLLAELHLSIPLFDSTSYAMYLEDGTLPGSLCELPPYVRLLVEACIQKDWMRRPSAKFLLESPYFPKTIKSSYTFLAPLQLVAKDETRLRYATNLAKKGALREMGSFAAEMCATYCLPLVLSTVNDAEAEWAYILLKEFMRCLKEKAVKKLILPTIQKILQTTGHLHLKVSLLQDSFVREIWNRVGKQVYLETIHPLVLSNLYNSLDKSSAASASVLLVGSSEELGVPITIHQTILPLFYCFGKGLCADGIDVLVRLGGIFGESFIVKQMLPLLKNVVRSFVDMSSMNKPDPVQSWSALALIDCVMTLDGLLPYLTEEIIVKELFEDQNCVLIRVLMQKHMDIAVLQVLQITHWLLLLLSLQYVSELGQI* 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4402 1090 Pfam Beige/BEACH domain 350 561 IPR000409 -
Amo19g4402 1090 CDD Beach 351 580 IPR000409 -
Amo19g4402 1090 Gene3D Transferase(Phosphotransferase) domain 1 693 794 - -
Amo19g4402 1090 Gene3D Transferase(Phosphotransferase) domain 1 201 323 - -
Amo19g4402 1090 Gene3D BEACH domain 341 580 IPR036372 -
Amo19g4402 1090 CDD PKc 207 288 - -
Amo19g4402 1090 SMART Beach_2 348 580 IPR000409 -
Amo19g4402 1090 PANTHER GH12955P 7 1071 - -
Amo19g4402 1090 ProSiteProfiles BEACH domain profile. 336 606 IPR000409 -
Amo19g4402 1090 SUPERFAMILY Protein kinase-like (PK-like) 206 290 IPR011009 -
Amo19g4402 1090 SUPERFAMILY Protein kinase-like (PK-like) 711 796 IPR011009 -
Amo19g4402 1090 MobiDBLite consensus disorder prediction 83 127 - -
Amo19g4402 1090 SUPERFAMILY BEACH domain 336 580 IPR036372 -
Amo19g4402 1090 Pfam Protein kinase domain 205 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4402 Amo-Chr19 161050536 161054938 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDKL-Cr Amo19g4402 Beach 5.1e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4402 K17601 - lja:Lj1g3v0112890.1 1724.52