Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4384 ATGGCCTCTCATTCTCCGAAAAGAGAATTAGGCCCTTTCCTAAGTCATCTCATTCTGATTCTGATATCCATCAACCCTTCACACCAATTTGAATACAAGGAAGAGCACAACTCTTATCGGTTCCTCCCTCAACTAAATCCGAGGCTCTCAAAAGCCTACATAGCACTCCAAGCATGGAAGCATTCAATAGTCTCAGACCCAAAGAACATGACCCTCAACTGGTGTGGACCCCACGTGTGCAACTACACCGGAGTTTACTGTGCACCAGCACCAGATAACCCCCACATATACACCGTTGCAGGAATTGACCTAAACCATGGCAACATAGCTGGTTCGTTGCCACAACAACTTGACCTCTTAACTGACCTGGCACTCTTCCACATCAACTCTAACCGATTTTGTGGCTCCCTCCCAACAACCTTCAACGGCCTCAAACTCCTCTTCGAGCTTGACGTCAGCAACAACGATCTCTCTGGCCCCTTTCCAGAAGTTGTTCTATGCCTCCCTTCTCTCAAATACTTAGACATAAGGTTCAACAACTTCCACGGCGCTATTCCCACGCGCCTCTTCGACCTCAAACTCGACGCGCTCTTCGTCAACAACAACAACTTCCAGTTCTCCTTGCCGGAGAATTTCGGAAACTCAACTGCCTCGGTTATTGTGTTCGCCAACAACAATCTGAGGGGATGTTTCCCCTCGAGTGTGGCGAAGATGAAGGACACGCTGAACGAGATCATAATTACGAATAGCGGGATAACGGGTTGTTTACCTCGTGAGATAGGGTTGTTGGAGAGAGTAACGGTTTTCGATGTGAGCTTCAACAAGATCGTTGGGGAATTACCAGAATCAATTGAAGGGATGAAGAAGTTGGAACAGTTGAACGTGGCGCATAACATGCTGTTTGGCACCATTCCCGAGAGTGTGTGCAACTTGCGGAGGCTGCAGAACTTTACGTACTCCTATAACTACTTCTGCGATGAATCTCCGCTGTGTTTGAAGCTTCCAGATAGTGATGATCGCAAGAACTGTATTCCTTATAGGCCACTACAATGGTCCCTTCAAGAATGTGCCGCTTTTTATAAACATCCGGTTCAATGTGCTGCCTTTGGTTGCTCAACAACTGCACCGGCGTCGCCAGCAGCACCACCACCTTCACCTCCACCTCCACCTCCACCACCGCCTCCACCACCACCTCCTCCTCTACCTCCATCACCTCCACCACCACCGCCATACTACCAGTATCCGTGA 1248 0.4896 MASHSPKRELGPFLSHLILILISINPSHQFEYKEEHNSYRFLPQLNPRLSKAYIALQAWKHSIVSDPKNMTLNWCGPHVCNYTGVYCAPAPDNPHIYTVAGIDLNHGNIAGSLPQQLDLLTDLALFHINSNRFCGSLPTTFNGLKLLFELDVSNNDLSGPFPEVVLCLPSLKYLDIRFNNFHGAIPTRLFDLKLDALFVNNNNFQFSLPENFGNSTASVIVFANNNLRGCFPSSVAKMKDTLNEIIITNSGITGCLPREIGLLERVTVFDVSFNKIVGELPESIEGMKKLEQLNVAHNMLFGTIPESVCNLRRLQNFTYSYNYFCDESPLCLKLPDSDDRKNCIPYRPLQWSLQECAAFYKHPVQCAAFGCSTTAPASPAAPPPSPPPPPPPPPPPPPPPLPPSPPPPPPYYQYP* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4384 415 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 19 390 - -
Amo19g4384 415 Pfam Leucine rich repeat 125 181 IPR001611 GO:0005515
Amo19g4384 415 SUPERFAMILY L domain-like 54 333 - -
Amo19g4384 415 MobiDBLite consensus disorder prediction 373 415 - -
Amo19g4384 415 Gene3D Ribonuclease Inhibitor 218 343 IPR032675 -
Amo19g4384 415 Gene3D Ribonuclease Inhibitor 51 217 IPR032675 -
Amo19g4384 415 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 6 19 390 - -
Amo19g4384 415 MobiDBLite consensus disorder prediction 377 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4384 Amo-Chr19 160881452 160882780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4384 43 371 Leucine-rich Repeat extension Gene Families AT3G22800 66.364 7.67e-156 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4384 - - adu:107467112 770
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4384 19 160881452 160882780 Amo19g4384 19 160881452 160882780 ECH