Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4359 ATGGACTTTGTAAGTTGTACAATGATCTTTGTATTGGCATGTGTGACCATTCATGCACTTTGTTTACTCTTTACAAAATCCACAAAGCCTAACTACAAGCTTCCTCCGGGACCCTCCCGGCTTCCGATAATCGGAAACCTCCTTGACATGGGGGAAAAGCCTCACTTGTCTTTGTCCAAGCTGGCGAAGATTCATGGTCCAATAATGAGTCTGCAGCTTGGACAAAAGACATCAGTAGTAGTCTCTTCCGCCGAAATGGCGAAAGAGATACTTCTAACCCATGACCACCACTTGTCAAACCGACCAATTCCACAATCCGTGTCGGTTCTCAACCATGAAAACTACAGCTTTGCATTTATTCCCATTTCCCCCCTTTGGCGCGAAATGAGAAAAATATGCAACACTCAACTATTATCCCACAAGAATCTTGATGATAGCCAACATGTTAGGCGTAACAAAATGCAACAACTCCTTAATGATGTTCACCATAGCAGCCAAATCGGTGAAGCTGTCGATATTGGAACACTAGGGTTCAAGGCTACCATAAATCTGTTATCTAACACCATTTTCTCCATAGATTTGATTGACTCTACAGATGCAGCGGGAGAGTTCAAGCATCTGGTTACCAACATCACAAACCTTGTTGGAACACCAAACTTGGCTGATTTCTTCCCCATGTTGAAGACGATTGACCCACAAGGCATTAACCGAAGGCAGGCTAAGAACGTAACAAAGGTTCTTGATATCTTCGACCGTTTGATTAACCAACGATTGAAGCTAAGAGAAAATGGTTTTCATAGCAAAAATGACATGTTGGATTCTCTACTCACCATTTCCAAGGACAACAAGTTGATTGATAAAACACTCATTGCACATCTATTCCATGATATATTCGTTGCCGGAACAGACACAACGGTATCTACCTTAGAATGGGCAATGAGTGAGTTAGTTCGTAACCCACAAGTTATGGAAAAGGCTAAAGAGGAATTAGGAGAAATAGTTGGCAACAATGGTAGTGTCCCTGTTGAGGAGTCAGATATTTCGAAACTACCATACTTACAAGCAGTAATAAAAGAGACGCTACGCCTGCACCCACCAGTTCCATTCTTGTTGCCACGAAAAGCTGAGATTGATGTGGACATTGGTGGCTACACCATCCCAAAAGATGCTCAAGTGATGGTTAATGTGTGGAACATTGGAAGGGATCCAAGCTTGTGGGACAATCCAACATTGTTTTCTCCGGAGAGGTTCATAGGTTCGGATATTGATGTTAAAGGAACGAACTTTGAACTGGTTCCGTTTGGTGCTGGAAGAAGAATATGTCCCGGATTACAATTGGCTAATAGGATGTTGTATTTGATGTTGGGTTCATTGATCAACTCCTTTGATTGGAAGCTTCAACATGGAATGAGATTAGAAGATATTGACATGACTGAGAAATTTGGAATTACCCTCCAAAAAGCTCAACCACTTAAAGTTTTTCCAATCAAGATAAGCAACTGA 1503 0.4172 MDFVSCTMIFVLACVTIHALCLLFTKSTKPNYKLPPGPSRLPIIGNLLDMGEKPHLSLSKLAKIHGPIMSLQLGQKTSVVVSSAEMAKEILLTHDHHLSNRPIPQSVSVLNHENYSFAFIPISPLWREMRKICNTQLLSHKNLDDSQHVRRNKMQQLLNDVHHSSQIGEAVDIGTLGFKATINLLSNTIFSIDLIDSTDAAGEFKHLVTNITNLVGTPNLADFFPMLKTIDPQGINRRQAKNVTKVLDIFDRLINQRLKLRENGFHSKNDMLDSLLTISKDNKLIDKTLIAHLFHDIFVAGTDTTVSTLEWAMSELVRNPQVMEKAKEELGEIVGNNGSVPVEESDISKLPYLQAVIKETLRLHPPVPFLLPRKAEIDVDIGGYTIPKDAQVMVNVWNIGRDPSLWDNPTLFSPERFIGSDIDVKGTNFELVPFGAGRRICPGLQLANRMLYLMLGSLINSFDWKLQHGMRLEDIDMTEKFGITLQKAQPLKVFPIKISN* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4359 500 Pfam Cytochrome P450 35 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4359 500 Gene3D Cytochrome P450 24 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4359 500 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4359 500 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4359 500 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4359 500 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4359 500 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4359 500 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4359 500 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4359 500 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4359 500 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4359 500 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4359 500 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4359 500 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4359 500 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 499 - -
Amo19g4359 500 SUPERFAMILY Cytochrome P450 35 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4359 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Amo19g4359 500 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4359 Amo-Chr19 160586957 160589179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4359 1 497 Cytochrome P450 AT2G45550 46.094 1.27e-156 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4359 - - gmx:100807367 739.184