LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo19g4347	ATGGCTTCTTCAACCAGCACCAAGGAGATAGACAGAGAGCTTCCACCTCTTCTGAGAGTTTACAAGGACGGAACCGTTGAACGCTTTCTAGGCTCTTCGTATGTGCCACCTTCACCACAAGACCCAGACACTGGAGTTTCATCCAAAGACATCGTCATATCAGAGAACCCTTTAATCTCTGCAAGGCTTTACCTTCCAAAACTTGAAAACCATCACCAGAAGCTTCCAATCTTGGTCTACTTCCACGGCGGCGCGTTTTGCCTCGAATCCGCATTCTCCTTCCTCCACCAACGCTACCTCAACATCATAGCTTCACAAGCAAAGGTTCTCGTAGCTTCCATAGAGTACAGGCTCGCACCAGAACACCCTCTTCCTGCTGCATATGAAGATGGATGGTATGCACTGAATTGGATCAGTTCCAACAAGAGCGAGCCATGGTTGATGAATCATGGAGATTTCAACAGATTCTACATAGGAGGTGACACTTCGGGTGCAAACATAGCACACTACGCATTGCTCCGCGTTGACCAGTTACCGAACCAAGTCAAAATCTCAGGGGCAGTGCTTGCTTTTCCATTGTTCTGGAGTTCAAAGCCGATTCTGAACGAACCAGTTGAAGGACATGAAGAGAGCTCAGCAATGCAGGTGTGGAAATTCGTGTACCCTGATGCACCGGGTGGTATTGACAACCCACTGATAAATCCATTGGCACCTGGTGCAGCGAGCTTGAAGGAGCTTGGGTGCCCTAAAATTCTGATCTTTGTTGCTGGCAAAGATGAGCTTAGGGACAGAGGGATTTGGTACTGTGATGCTGTGAAGAAGAGTGGGTGGAATGGTGACGTGGAACTTATTGAAGTTGAAGGAGAGGAACACTGTTTTCAGATCTATCATCCTCAAACTCATAACTCCAACAACATGATTAGTCGCATAGCCTCTTTCCTTGTTTGA	948	0.4726	MASSTSTKEIDRELPPLLRVYKDGTVERFLGSSYVPPSPQDPDTGVSSKDIVISENPLISARLYLPKLENHHQKLPILVYFHGGAFCLESAFSFLHQRYLNIIASQAKVLVASIEYRLAPEHPLPAAYEDGWYALNWISSNKSEPWLMNHGDFNRFYIGGDTSGANIAHYALLRVDQLPNQVKISGAVLAFPLFWSSKPILNEPVEGHEESSAMQVWKFVYPDAPGGIDNPLINPLAPGAASLKELGCPKILIFVAGKDELRDRGIWYCDAVKKSGWNGDVELIEVEGEEHCFQIYHPQTHNSNNMISRIASFLV*	316

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo19g4347	315	PANTHER	ARYLACETAMIDE DEACETYLASE	5	314	-	-
	Amo19g4347	315	ProSitePatterns	Lipolytic enzymes "G-D-X-G" family, putative histidine active site.	78	94	IPR002168	GO:0016787
	Amo19g4347	315	SUPERFAMILY	alpha/beta-Hydrolases	16	314	IPR029058	-
	Amo19g4347	315	PANTHER	2-HYDROXYISOFLAVANONE DEHYDRATASE	5	314	-	-
	Amo19g4347	315	Pfam	alpha/beta hydrolase fold	78	294	IPR013094	GO:0016787
	Amo19g4347	315	Gene3D	alpha/beta hydrolase	8	315	IPR029058	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo19g4347	Amo-Chr19	160239390	160240830	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo19g4347	9	314	Carbohydrate Esterase	AT3G48700	38.080	2.20e-76	235

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo19g4347	-		K13258	gmx:100785409	499.975