Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4319 ATGGCAGAACCTGCATATACTGTAGCATCTGATTCTGAGACCACAGGAGAGGAAAAGTCATCTTCAACTTTTCCTGAAATTGCCATTGGAATTGATATTGGCACATCTCAATGCAGCATTGCTGTGTGGAATGGTTCCCAAGTGGAGCTTTTGAAGAACACAAGAAATGAGAAGATAATGAAGTCCTATGTCACTTTCAGAGATGATCTACCTTCTGCTGGAGTTAGCAATAACCTTTCACATGAGCATGAAATGTTATCTGGATCTGCAATCTTCAACATTAAACGATTAATTGGCAGAACTGATGCTGATCCAATCATCCATTCCTGTAAAAATCTCCCATTTCTGGTTCAGACATTGGAAATTGGTGTCCGCCCATTTATCGCTGCCTTGGTGAACAATATGTGGAGATCCACCACTCCTGAAGAAGTGTTGGCAATATTTCTGGTGGAGTTAAGAGCAATGGCTGAAGCTCAATTGAAATGTCCAATAAGAAATGTAGTGATTACAGTTCCAGTTTCATTCAGTCGGTTCCAGCTAACCCGGGTTGAACGTGCTTGTGCCATGGCCGGCCTTCATGTCCTCAGGCTGATGCCTGAACCAACAGCTGTGGCTTTGTTATATGCACAACAGCAGCAGCAGACATCTAATGAGAATATGGGCAGTGGTGGTGAGAAAATCGCCCTCGTTTTCAATATGGGTGCTGGTTATTGTGATGTCGCCGTGACTGCTACAGCCGGAGGAGTTTCACAGATAAAATCCTTGGCAGGAAGTACCATCGGTGGGGAAGACTTACTTCAGAATGTGATGCGCCATCTCTTGCCAGATTCTGAAAGCTTATTTAGGAGTCACAGTGACAAAGAAATCAAGACAATTGGCTTGCTTCGACTTGCGACTCAGGATGCAATTCATAGGCTTTCTTCTCAGTCCAATGTCCAGGTTGATATAGACTTGGGAGATGGACTGAGGATATGCAAGGTTATTGACCAGGAAGAGTTTGAGGAAGTAAACAGAACAATATTTGAGGAGTGTGAAAGCCTTATTATCCGGTGCTTGCAAGATGCGAAGGCAGAAGTTGAGGATGTAAATGATGTGATAATTGTTGGTGGATGCTCTCATATTCCAAAGGTGAAGAATCTTGTTAGTAGCATATTCAAAGGGAAGGAACTTTATAAAGGGATGAATCTCTTGGAAGCTGCCGTCTGTGGCGCAGCAGTGGAAGGAGCTATTGCTTCGGGTATCAGTGATCCCTTTGGGAACTTGGACTTGTTAACCATCCAATCAACGCCTCTTGCTATTGGGATTCGAGCTGATGGAGGCAATTTCGTCCCTGTAATACCTAGGAATACTGCAACCCCTGTGAAGAAGGAGCTAGTATTTACCACTCTTCATGATAATCAAACCGGGGCATTGATTATTGTATATGAAGGTGAAGGAAAGAAGGCAGAGGAGAATCACTTGCTGGGATATTTTAGGATAATGGGAATACCTTCAGCACCAAAAGGCATTCCAAAAATTAATTTGTGCATGGACATAGATGCTGCAAACATGTTGCGAGTTTTAGCTGGTGTTGTGATGCCTGGATCACGACATCCTGCAATTCCTGTCATGGAAGTGAGGATGCCAATGGTTGATGATGGGCATGGTTGGTGTGCTGAGGCTCTAAATAGAACCTATGGTTCTACACTGGATTTGGTAACTGTACATACAAAGGGATAG 1719 0.4357 MAEPAYTVASDSETTGEEKSSSTFPEIAIGIDIGTSQCSIAVWNGSQVELLKNTRNEKIMKSYVTFRDDLPSAGVSNNLSHEHEMLSGSAIFNIKRLIGRTDADPIIHSCKNLPFLVQTLEIGVRPFIAALVNNMWRSTTPEEVLAIFLVELRAMAEAQLKCPIRNVVITVPVSFSRFQLTRVERACAMAGLHVLRLMPEPTAVALLYAQQQQQTSNENMGSGGEKIALVFNMGAGYCDVAVTATAGGVSQIKSLAGSTIGGEDLLQNVMRHLLPDSESLFRSHSDKEIKTIGLLRLATQDAIHRLSSQSNVQVDIDLGDGLRICKVIDQEEFEEVNRTIFEECESLIIRCLQDAKAEVEDVNDVIIVGGCSHIPKVKNLVSSIFKGKELYKGMNLLEAAVCGAAVEGAIASGISDPFGNLDLLTIQSTPLAIGIRADGGNFVPVIPRNTATPVKKELVFTTLHDNQTGALIIVYEGEGKKAEENHLLGYFRIMGIPSAPKGIPKINLCMDIDAANMLRVLAGVVMPGSRHPAIPVMEVRMPMVDDGHGWCAEALNRTYGSTLDLVTVHTKG* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4319 572 Gene3D - 29 409 - -
Amo19g4319 572 PANTHER HEAT SHOCK 70 KDA PROTEIN 8 4 570 - -
Amo19g4319 572 PANTHER HEAT SHOCK PROTEIN 70KDA 4 570 IPR013126 GO:0005524|GO:0140662
Amo19g4319 572 Gene3D Actin; Chain A, domain 4 262 343 - -
Amo19g4319 572 CDD HSP70_NBD 29 409 - -
Amo19g4319 572 PRINTS 70kDa heat shock protein signature 394 414 - -
Amo19g4319 572 PRINTS 70kDa heat shock protein signature 167 187 - -
Amo19g4319 572 PRINTS 70kDa heat shock protein signature 422 441 - -
Amo19g4319 572 PRINTS 70kDa heat shock protein signature 503 519 - -
Amo19g4319 572 PRINTS 70kDa heat shock protein signature 362 378 - -
Amo19g4319 572 PRINTS 70kDa heat shock protein signature 27 40 - -
Amo19g4319 572 PRINTS 70kDa heat shock protein signature 55 67 - -
Amo19g4319 572 SUPERFAMILY Actin-like ATPase domain 224 412 IPR043129 -
Amo19g4319 572 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 424 529 IPR029047 -
Amo19g4319 572 MobiDBLite consensus disorder prediction 1 21 - -
Amo19g4319 572 Pfam Hsp70 protein 28 522 IPR013126 GO:0005524|GO:0140662
Amo19g4319 572 Gene3D - 92 147 - -
Amo19g4319 572 SUPERFAMILY Actin-like ATPase domain 27 210 IPR043129 -
Amo19g4319 572 Gene3D - 213 391 - -
Amo19g4319 572 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 419 533 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4319 Amo-Chr19 160000091 160002588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4319 28 531 Calmodulin-binding Proteins AT3G12580 36.965 3.20e-104 326