Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4317 ATGAATGGTGGTGCAAGTGCTGAGGCAGAGGCAGAGTACTCTGAATTTGTGGAAGTTGATCCTAGTGGAAGATATGGAAGATATAATGAAATTCTTGGTAAAGGAGCTTCCAAGACAGTTTATAGAGCATTTGATGAGTATGAAGGGATAGAAGTTGCATGGAACCAAGTGAAGCTTTACGACTTTCTGCAGAATCCAGAAGACCTTGAGAGATTATACTGTGAAATTCATCTTCTCAAGACATTGAAACACAAGAACATCATGAAGTTCTACACTTCCTGGGTTGATACTACCAACAGACACATAAATTTTGTCACTGAGATGTTCACTTCTGGGACTCTAAGACAGTACAGGCTTAAACACAGAAGGGTTAACATCAGAGCTGTTAAGCATTGGTGCAGGCAGGTTTTGGAAGGGCTTCTCTATCTACACAGCCATGACCCTCCTGTGATCCACAGAGATCTCAAGTGTGATAACATTTTCATCAATGGCAACCAAGGAGAAGTTAAAATTGGGGATCTTGGCCTTGCTGCAATTCTTCGCAAATCTAATGCCGCTCGCTGTGTTGGCACACCTGAGTTTATGGCTCCTGAAGTATATGAAGAGGATTACAATGAATTGGTTGACATATACTCTTTTGGAATGTGCATGTTGGAGATGGTCACCTTTGAATATCCTTACAGTGAATGCAACCATCCTGCTCAAATTTACAAGAAAGTTTCCTCTGGGAAAATGCCAGAGGCTCTTTACAAAGTAAATGATCCCGAGGTTCGGCAATTCGTAGAGAAATGCTTAGCAACTGTGTCCCTCAGACTTTCAGCAAAGGAACTATTGGAGGACCCTTTTCTCCAACTTGATGATTATGGATATGACTTGAAACCATTCCAATATCAAAGAGACTGCTTTGAAGTAACCCCAATAATTAGACAGTCTCTTAATGGAATTCATAGCAGCAACACCACCTTAATGAGTGGCTCCACCGATAATCCTGGTGGTTATGGACCTGTATCTGAACTGGATTATCACCAAGATGATTTTGAAACAAGTGAAATAGATCTCTTTGATTGTGAGGAGGACGAAAAATTAGCTGAATTCGACGCCTCAATTAAAGGTAGGAGAAGAGAAGATGATGGCATCTTTCTGAGAATCAGAATAGCAGATAAGGAAGGTCGAGTTCGAAACATCTATTTCCCGTTTGACACCGAGACTGATACTGCATTGAGCGTTGCTTCTGAAATGATAGCTGAACTTGACATAACTGACCAAGATGTAACAAAGTTAGCAGATATGATAGATAATGAAATTGCAAACTTGGTCCCTGAGTGGAAAAGGGGACCCAGAATAGAGGAAAGTTTACAATGTGAAAGTGAAAATTTCTGCCACAATTGTGCTAGAAACGGTTCTTTATTTGATTATGCATCATCAGATAATCCATGTGCCAAGAATCTGCAATTTTTCCATTGTTCTAAGAACGGATGCGCAGCAGTTCATGGCAGATTCGAGGAGATTACTTATCAAGTTGAAGGGTCTGAAAACTGTGCTACAGAAGGTGCACAAGATCCATCATACCAACCCAAAGGCATTCGTTGTACTGATATCTGGGCGCAGCGCGATGAACCAGACTTGTGTTCTGAAGAGTTAAAAGACATACAATGTGATGACAAGTCTAATGAGACATCAAATCAATCAACCATCAAGGATGGTGGAAGAACTATTGATGTGGATGACCAAAGTGATCTCAATGCTAGAAAGCTACCTTCTATTCCTTCGTCGGATTGTGTTCTTCTGGACTATGAGAATGAAATTAGACAAGAACTGAGATGGCTAAAAGCTAAGTACCAGATGCAGTTAAGAGAGCTTAGAGACCAGCAACTAGGGAGTAAACCAAAATTTGACACCGAAAAATTAGAGCTATCAGCTACATCCCACTCGAAGTTACAGGACAAGAAACCATTGCTGAGGCCTATGGTTTGTGGTAACAATTTTCTTGTTGATGCTGAGAAGTGCACAAGTTTGGCTGATCAAATGGTTCAAAATGGTGATGAGACAAGTGAGGCTAACAGTCCAGAACAAATGATCACAGCCAAGGATTTCTTTGCAGGAGCTTTGCTTCCACAGTCTCTTTACAGGGCCACTTCTCTTCCTGTTGATGCAGTAGATGTCTAG 2166 0.4104 MNGGASAEAEAEYSEFVEVDPSGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQNPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTTNRHINFVTEMFTSGTLRQYRLKHRRVNIRAVKHWCRQVLEGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSNAARCVGTPEFMAPEVYEEDYNELVDIYSFGMCMLEMVTFEYPYSECNHPAQIYKKVSSGKMPEALYKVNDPEVRQFVEKCLATVSLRLSAKELLEDPFLQLDDYGYDLKPFQYQRDCFEVTPIIRQSLNGIHSSNTTLMSGSTDNPGGYGPVSELDYHQDDFETSEIDLFDCEEDEKLAEFDASIKGRRREDDGIFLRIRIADKEGRVRNIYFPFDTETDTALSVASEMIAELDITDQDVTKLADMIDNEIANLVPEWKRGPRIEESLQCESENFCHNCARNGSLFDYASSDNPCAKNLQFFHCSKNGCAAVHGRFEEITYQVEGSENCATEGAQDPSYQPKGIRCTDIWAQRDEPDLCSEELKDIQCDDKSNETSNQSTIKDGGRTIDVDDQSDLNARKLPSIPSSDCVLLDYENEIRQELRWLKAKYQMQLRELRDQQLGSKPKFDTEKLELSATSHSKLQDKKPLLRPMVCGNNFLVDAEKCTSLADQMVQNGDETSEANSPEQMITAKDFFAGALLPQSLYRATSLPVDAVDV* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4317 721 Gene3D Phosphorylase Kinase; domain 1 9 107 - -
Amo19g4317 721 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 5 710 - -
Amo19g4317 721 Gene3D Transferase(Phosphotransferase) domain 1 109 288 - -
Amo19g4317 721 MobiDBLite consensus disorder prediction 554 573 - -
Amo19g4317 721 SUPERFAMILY Protein kinase-like (PK-like) 29 284 IPR011009 -
Amo19g4317 721 Gene3D - 378 473 - -
Amo19g4317 721 ProSiteProfiles Protein kinase domain profile. 26 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4317 721 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1-RELATED 5 710 - -
Amo19g4317 721 CDD STKc_WNK 24 283 - -
Amo19g4317 721 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Amo19g4317 721 Pfam Protein kinase domain 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4317 721 SMART serkin_6 26 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4317 721 Coils Coil 603 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4317 Amo-Chr19 159970542 159974263 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4317 1 503 MAP Kinase Kinase Kinase AT3G22420 58.640 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Amo19g4317 Pkinase 1.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4317 K08867 - gmx:100804179 1181.39