Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4308 ATGCTGCTAGATGTGGTTTGGAACCCCTCGGTCGAAAGGCAAGCTATAAGCTGTGCTTATAGGCTGGGCCAAAAGAAGGTGGTCTACACTTATCATCTCATAACACATGGGACCACCGAGTACAGAAAATACTGCCATCAGGCCAAGAAGGACCAGTTGTCTGAACTGGTCTTTTCAGCAAGGAACACTGAACAGGATGAGCCCAAGAGTTTTGCCGTGGAAATCGAGGATGAAATTCTCGATTAG 246 0.4715 MLLDVVWNPSVERQAISCAYRLGQKKVVYTYHLITHGTTEYRKYCHQAKKDQLSELVFSARNTEQDEPKSFAVEIEDEILD* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4308 81 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 4 1 81 - -
Amo19g4308 81 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 1 81 IPR044567 GO:0080188
Amo19g4308 81 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 63 IPR027417 -
Amo19g4308 81 Gene3D - 1 81 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4308 Amo-Chr19 159765257 159765502 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4308 1 53 RAD5 or RAD16-like Gene Family AT5G43530 41.509 2.13e-08 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4308 K10875 - lja:Lj1g3v3609480.1 117.857