Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4267 ATGGATGCCGTGTGCTACGAAAAGGGTGCAGCGAAGAGTGCATGCTACGACATTGCCTGGTGTGGATACAGGACAATCCACGAGCACAGGGTTACGCCACCCTCTTCGTCGCCAAGTTCTTCGGCCGCGCCAACCTCATGTCTTTCCTTTCCTCCGTTCCCACCAACCACAGATCCGTCACTTTTATATGAGGCAGTGGGTCGTACCATAAATCCTGTGAGTGGGGCAGTGGGGCTGCTCTCGACAGGCAACTGGCATCTCTGCCAGTCCGCGGTGGACAAAGTGCTGCGAGGGGGCGGCGCCGCCTTGACGGAAAGTAGTGATCATTTGAAAGAAGCAGAATCAGAAGAGAGAATTGAATCAAAGAAGCAACCAGCCAGCAACACAACAACTACTCATCATTGGCCTTCTCAAACGACTGAAACCAAGCTGCTTACGCTTTTCTTATGA 450 0.5267 MDAVCYEKGAAKSACYDIAWCGYRTIHEHRVTPPSSSPSSSAAPTSCLSFPPFPPTTDPSLLYEAVGRTINPVSGAVGLLSTGNWHLCQSAVDKVLRGGGAALTESSDHLKEAESEERIESKKQPASNTTTTHHWPSQTTETKLLTLFL* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4267 149 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 55 130 - -
Amo19g4267 149 MobiDBLite consensus disorder prediction 106 139 - -
Amo19g4267 149 MobiDBLite consensus disorder prediction 124 139 - -
Amo19g4267 149 MobiDBLite consensus disorder prediction 107 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4267 Amo-Chr19 159364085 159364800 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4267 55 99 AS2 family AT3G49940 71.111 2.63e-16 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Amo19g4267 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4267 19 159364085 159364800 Amo19g4267 19 159364085 159364800 ECH