Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4234 ATGTTTGACTATGAAAAAGAGCAAGCAGAAAGTAGTCCAGATTCACTAACGCAATCTCTATATACAATACAAACTTTGTATCTGAATCCACTATGTATCTTACTCTCACTCCCAATCCCAAACATTCCCCAACGCAACACAATGATCACACCTTCTCTCAGTTTCCTCCTCCTCCTCTTCACTGTGGCCTCCGCAGTGCCAAGTTTCTTGAACTACAGCTGCATCACCGCCAACAACCCAGCCAGCACCACCTACCTCAACAACCTCAACATCCTCTTAACCAATCTCACTTCCAACACACAAATCGACTACGGCTTCTACACTTCCTTCTTCGGCCACAACACTGACACAGCCTACGCTATTGGCATGTGCAGAGGAGACGTCAACCTCAACGATTGCCGAAGCTGCCTCAATGATTCCAGACTCCTTCTCACTCAGATATGTCCCAACTACCAAGCCGTTGGTTGGTACGAATACTGCATGCTTCGGTACTCCAACCTTTCCATGCTCGGAAGAGTTGCGGATCATCCACAATTCTCTTTGTGGAATCCCTACTTCATTTCTTCCAAAGAGTTCAATCAGTTCAACAAATCACTCAACACCTTGATGGACAAGCTCAGAATCGAAGCTTCTGGAGGTGACTATCGTCGTAAGTATGCCTTCCAAAACGTGACTTCTGGAATTCAGAGCTACAAAGGCATATTTGGCCTTGCACAGTGCACACCTGATTTGTCTCGGCAACAGTGCGACGATTGCCTGTTTGGGGCATTTTCGGAAATTCAAGGTTGTTGTAATGGTAGGAGAGGTGCTAGGGTTATCAAACCCAGTTGTAACATTAGATATGAAATCTACCCTTTCTTGACGTCTACCATTGATGCATTCTCACCGTCAAACGCTCCAGGAAAAGGTAGCAATACATCACGAACCACCGTCATCATCGTCATCATAGTTGTTGTTGCTGTTGCTGCCGCTGCTGCTTCTATTTTGGTGCTCAGTTATGTGTACGTCTATTTAAGAAAAAATTTTCAAACTGATGAATCGAATGAAGAAATCATAGCTGATGAATCATTACAGTTCACCTTTGATACCATACGAGTTGCTACAGAGGATTTCTCATATTCTAATAAATTAGGAGAAGGTGGATTTGGATCTGTTTATAAGGGAAAGCTCTCCAATGGACAAATGATTGCTGTGAAGAGGTTATCGAAGGACTCAGGCCAAGGAGAGATGGAATTCAGGAATGAAGTGCAGTTATTAGCTGAGCTTCAACACCAAAATTTGGTTAAGCTTCTTGGTTTTTGCTTGAAAGGAAGTGAAAGTGGATATATGGCGCCCGAATACGCTATGTACGGACAATTTTCAGTCAAGTCAGATGTCTTTAGTTTTGGCGTCCTAGTTCTTGAAATCGTGAGCGGCCAAAAACACAATTGCACACGCCGCGGAGATACTTTAGAGGAGTTACCCCTAACCTTTGCATGGAGAAGTTGGATGGAGGGCAGAGCTGCAAATATTATAGATCCATCACTAAGCAACAGTGCAGAAAATGAAATATTGAGATGCATTCACATTGGTTTGCTGTGTGTTCAAGAGAATTTAGTTGAGAGACCAACCATGGCTTCCATTGTATTGATGCTTAATAGCTCATCTCTGAGTCTTCCAGTACCAATGGAACCTGCATTTTTCGCGGGAAGCAGAGCCAAAAGTCCTCGAGTTGCGGATAAACAGTCAGAGGAGTATATTTTAAAGGGAACAAATGAATCAACAGGACTTAAACTAGGCACACAATCTTTGATTTTGGAAGGCACTTTGATTTATTCTGATACAGAATAA 1830 0.4301 MFDYEKEQAESSPDSLTQSLYTIQTLYLNPLCILLSLPIPNIPQRNTMITPSLSFLLLLFTVASAVPSFLNYSCITANNPASTTYLNNLNILLTNLTSNTQIDYGFYTSFFGHNTDTAYAIGMCRGDVNLNDCRSCLNDSRLLLTQICPNYQAVGWYEYCMLRYSNLSMLGRVADHPQFSLWNPYFISSKEFNQFNKSLNTLMDKLRIEASGGDYRRKYAFQNVTSGIQSYKGIFGLAQCTPDLSRQQCDDCLFGAFSEIQGCCNGRRGARVIKPSCNIRYEIYPFLTSTIDAFSPSNAPGKGSNTSRTTVIIVIIVVVAVAAAAASILVLSYVYVYLRKNFQTDESNEEIIADESLQFTFDTIRVATEDFSYSNKLGEGGFGSVYKGKLSNGQMIAVKRLSKDSGQGEMEFRNEVQLLAELQHQNLVKLLGFCLKGSESGYMAPEYAMYGQFSVKSDVFSFGVLVLEIVSGQKHNCTRRGDTLEELPLTFAWRSWMEGRAANIIDPSLSNSAENEILRCIHIGLLCVQENLVERPTMASIVLMLNSSSLSLPVPMEPAFFAGSRAKSPRVADKQSEEYILKGTNESTGLKLGTQSLILEGTLIYSDTE* 610
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4234 609 ProSitePatterns Protein kinases ATP-binding region signature. 377 399 IPR017441 GO:0005524
Amo19g4234 609 Pfam Protein tyrosine and serine/threonine kinase 442 542 IPR001245 GO:0004672|GO:0006468
Amo19g4234 609 Pfam Salt stress response/antifungal 191 283 IPR002902 -
Amo19g4234 609 Pfam Salt stress response/antifungal 77 166 IPR002902 -
Amo19g4234 609 Gene3D Transferase(Phosphotransferase) domain 1 440 549 - -
Amo19g4234 609 ProSiteProfiles Gnk2-homologous domain profile. 175 286 IPR002902 -
Amo19g4234 609 Gene3D Phosphorylase Kinase; domain 1 334 439 - -
Amo19g4234 609 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 53 439 - -
Amo19g4234 609 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 441 579 - -
Amo19g4234 609 SUPERFAMILY Protein kinase-like (PK-like) 357 564 IPR011009 -
Amo19g4234 609 ProSiteProfiles Protein kinase domain profile. 371 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4234 609 ProSiteProfiles Gnk2-homologous domain profile. 67 169 IPR002902 -
Amo19g4234 609 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 441 579 - -
Amo19g4234 609 Gene3D - 66 168 IPR038408 -
Amo19g4234 609 Gene3D - 181 286 IPR038408 -
Amo19g4234 609 Pfam Protein kinase domain 373 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4234 609 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 53 439 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Amo19g4234 Amo-Chr19 159063382 159066891 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4234 60 572 Receptor kinase-like Gene Family AT4G23280 34.134 1.36e-83 272
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo19g4234 PK_Tyr_Ser-Thr 6.9e-08 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4234 - - egr:104445464 390.963