Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4232 ATGGCACTTTCCAGAATGCTATTATTTCTTTGTATCCTTGTCATACTCTTACCTCAACCCAAAGCGCAGCCAAACTTTCTATACTCCTTCTGTATAGATGACAATGGCAATTACACTGCTAATAGTACCTACAGCAGCAACCTTAACACCCTTTTGTCCAACCTTTCTTCCAACAAAAACATTGATTATGGCTTTTACAACTTCTCTTATGGCAAAGACAACGACAGAGTCAACGCAATAGGGCTATGCAGAGGAGATGTGAAGCAAAATGATTGCCTTAGCTGCCTCAATGATTCAAGAGTCCTACTCACAAGTCTCTGTCCAAATCAAAAGGAAGCAATTGGTTGGTATGACAAGTGCATGCTTCGCTACTCAAACCGATCATCAATATTTAACAGAATGGAAACTTATCCTAATTTCTTCATGAGGAACAGTGGAAATGCAACAGATGTTGATGAGTTCAACAAAGTGCTGGATACCCTTCTAAATGATCTAATAAGCAATGCTTCATCTGGGAACTCGGAGCGAAAATTTGCTGCATCAAGTTCGAAAGGACCAGGCTTCCAAACAGTCTATGGTCTTGTGCAGTGTACACCTGATTTGTCTCAGCAAGACTGCTATGCTTGTTTGATTCAGGCTATCACAGGAATCCCACAGTGTTGTGATAGCAAGAAAGGTGGTAGAATTTTGGAACCTAGCTGTAACTTCAGGTATGAGATATACCCCTTCTATGACCTTGCAAATGTTACACCTCCACCAGCACCAGCGCCAGATTCTGCTACTCATCCCTCATCTACTGATATGGATTCAACACAAGGAAAGAGCAGCAACACATCACGAAATGTAGTAATAGCAATAGTTGTGCCAATTACTGCTTTGGTTATATTGATCATCCTTATTTGCATCTATTTAAGAAGGAGGAGGATGCGGTCGCCAACACAAGTTGAAGCACGCACTGATCATAACATACCACCAATTAAAGCTGAAGACAGTGATGAATTTAGATCATCTGAGACATTGCAGTTGGACTTTGCCACCATCATGGCCGCTACCAACAACTTTTCTGATGAGAATAAGTTAGGACAAGGTGGATTTGGACCTGTTTACAAGGGAAGGCTCTCCAATGGGCAGGAGGTTGCAGTCAAAAGATTGTCCATAAATTCTTTGCAGGGAGATTTAGAGTTTAAGAATGAAGTGATGTTAGTGGCCAAGCTTCAGCACCGAAACTTGGTTAGGATACTTGGCTGTTGTTTGGAAAGAAGAGAAAGGTTACTGATTTATGAATATGTTCCCAATAAAAGCCTTGATTTCTTCATATTTGACCAAATCAAACGCGCACAATTGGATTGGAAAAGAAGGTACAAAATCATAGGAGGCATTGCTCGAGGTTTACTTTACCTTCACGAGGATTCCCGTTTGAGAATCATTCATCGTGATCTCAAAGCAAGCAACATTCTCTTAGATACAGAAATGAACCCAAAAATATCAGATTTCGGCTTAGCAAGACTATTTGCCGTGGATCAAACTCAAGGCAAAACAAGTAGAATCGTTGGAACTTATGGATACATGGCGCCTGAATATGCATTTCGTGGACAATTTTCAACAAAATCCGACGTTTATAGTTTTGGTGTACTAGTTCTTGAGATTGTAAGCGGCCAGAAGAACAGTAGTGTTCGTCGAGGGGAGAATGCAGAGGACATAGTGAGCTTTGCATGGAGAAGCTGGAGAGAAGGGACAGCATCAAACATTGTTGATCCGACAATTACTGATGGATCAAGAAATGAAATAATGAGATGTATCCACATTGGCTTGCTTTGTGTTCAGGAAAATGTAGCTGACAGACCAACCATGGCTTCGGTTATAATCATGCTTAACAGCCACTCTGTTACTCTTCCATTGCCTTCACAACCTGGTCTTTTGATTCATAATAATAGAAGTTTATCAGACATCCATTCAGAAGAGTACAATTCGGAGACAAGAGGTTCAACTGAATCAGGTAACCAATCTGTTCAAGCATCGGAGAATGAAGATTCCATTACTGAGCCATTTCCCCGCTAG 2058 0.4096 MALSRMLLFLCILVILLPQPKAQPNFLYSFCIDDNGNYTANSTYSSNLNTLLSNLSSNKNIDYGFYNFSYGKDNDRVNAIGLCRGDVKQNDCLSCLNDSRVLLTSLCPNQKEAIGWYDKCMLRYSNRSSIFNRMETYPNFFMRNSGNATDVDEFNKVLDTLLNDLISNASSGNSERKFAASSSKGPGFQTVYGLVQCTPDLSQQDCYACLIQAITGIPQCCDSKKGGRILEPSCNFRYEIYPFYDLANVTPPPAPAPDSATHPSSTDMDSTQGKSSNTSRNVVIAIVVPITALVILIILICIYLRRRRMRSPTQVEARTDHNIPPIKAEDSDEFRSSETLQLDFATIMAATNNFSDENKLGQGGFGPVYKGRLSNGQEVAVKRLSINSLQGDLEFKNEVMLVAKLQHRNLVRILGCCLERRERLLIYEYVPNKSLDFFIFDQIKRAQLDWKRRYKIIGGIARGLLYLHEDSRLRIIHRDLKASNILLDTEMNPKISDFGLARLFAVDQTQGKTSRIVGTYGYMAPEYAFRGQFSTKSDVYSFGVLVLEIVSGQKNSSVRRGENAEDIVSFAWRSWREGTASNIVDPTITDGSRNEIMRCIHIGLLCVQENVADRPTMASVIIMLNSHSVTLPLPSQPGLLIHNNRSLSDIHSEEYNSETRGSTESGNQSVQASENEDSITEPFPR* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4232 685 CDD STKc_IRAK 360 625 - -
Amo19g4232 685 MobiDBLite consensus disorder prediction 652 685 - -
Amo19g4232 685 MobiDBLite consensus disorder prediction 260 276 - -
Amo19g4232 685 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 5 664 - -
Amo19g4232 685 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 5 664 - -
Amo19g4232 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Amo19g4232 685 ProSiteProfiles Gnk2-homologous domain profile. 26 129 IPR002902 -
Amo19g4232 685 Pfam Salt stress response/antifungal 31 126 IPR002902 -
Amo19g4232 685 Pfam Salt stress response/antifungal 146 240 IPR002902 -
Amo19g4232 685 ProSiteProfiles Gnk2-homologous domain profile. 136 243 IPR002902 -
Amo19g4232 685 Pfam Protein tyrosine and serine/threonine kinase 357 621 IPR001245 GO:0004672|GO:0006468
Amo19g4232 685 Gene3D Transferase(Phosphotransferase) domain 1 430 631 - -
Amo19g4232 685 MobiDBLite consensus disorder prediction 659 678 - -
Amo19g4232 685 Gene3D - 138 243 IPR038408 -
Amo19g4232 685 Gene3D - 23 128 IPR038408 -
Amo19g4232 685 SMART serkin_6 354 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4232 685 SUPERFAMILY Protein kinase-like (PK-like) 344 645 IPR011009 -
Amo19g4232 685 MobiDBLite consensus disorder prediction 252 276 - -
Amo19g4232 685 Gene3D Phosphorylase Kinase; domain 1 317 429 - -
Amo19g4232 685 ProSiteProfiles Protein kinase domain profile. 354 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4232 Amo-Chr19 159034185 159037183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4232 1 685 Receptor kinase-like Gene Family AT4G21410 50.215 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo19g4232 PK_Tyr_Ser-Thr 2.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4232 - - lang:109353867 903.664