Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4231 ATGGCTATGGCACCTTCAAGTTCAAGAGTGATTTCTCTACTTCTTTGTCTTCTTTTTACGCTTATTTCTCATACTACAGCTCAGCCAAGCTTCCTGTACCATTTTTGCATGAATGATAAAGGAAACTACACAGAAAACAGTGCCTACCACACCAACCTCAACACTCTTTTGTCCACTTTGTCTTCAAATACAGAAGTTGATTATGGCTTCTACAACTTCTCTCAGGGACAAGGCTCTGACAAAGTTAATGCAATTGGGATGTGTAGAGGAGATGTTAAGCCGGAATCTTGCCGCAGTTGTCTCAATGATTCCAGAGTCCTTCTGATGCATCGTTGTCCGAATCAGAAGGAGGCTATAGGTTGGTATGACAACTGCATGTTGCGCTATTCGAACCGGTCCATATTTGACACCATGGAACCTGACCCTACCTACTTTCTGTGGGTTGGAATCAATGCAACTGATATGAATCAGTTCATTCAAGTGCTTAGGAACTTGCTGGAAAGCCTTAGAACAAATGCTTCATCAGGTGATTCCCTTAAAAAGTATGCTGCAGGAAGCGCGGCCGGACCAAGCTTCCAGACTATATTTGCTCTTCTGCAATGCACACCTGATTTATCAGAGCAAGAATGTGATGATTGCTTGGTCAGGGCCATCTCAAATATTAATGATCGTTGTTATGGCTTGACAAAGTGCAGAATTGGAAAACCAAGCTGCAATCTTAGATTTGATACTTCACCTTTCTATGACTCTACAGCTGATACTTCTCCGCCTTCGCCATCAAAAGAATCTCCTCCTCCTCCAGTCACCAATACTAATGCCACTTCTACCAAAGGAAAGAGCAACTCAACAGGTATTGTCATTGCAGTGGTAGTGCCGATTTTCGTCGTTTTAGTACTGCTCATCTCTGTTTGCATCTTCATAAGAGCAAGGAAGCGCAAGAGAAGTTTTCACAATCACAATGACACTGAAGTTAACAATGAAATTGAACCTATTGAGTCATTGCAATTCAACTTTGACACCATCAGAACGGCTACTAATAACTTTTCAGAAGAAAATAAGCTAGGACGAGGAGGATTTGGACCTGTTTACAAGGGTAAGCTTTCTAATGGAAGAGAAATTGCAGTCAAAAGGCTGTCAATGAATTCAGGACAAGGAGACACAGAATTTAAGAATGAAGTGCTGTTAGTGGCCAAGCTTCAGCACCGCAATTTAGTTAGGCTACTTGGTTTTTGCTTGGAAAGAAAAGAAAGATTACTGGTTTATGAGTTTGTTCCTAATAAAAGTCTTGATTACTTCATATTTGATCCAATCAAACGTGCTCATCTGGATTGGGAAAAGAGATACAAAATCATTGGAGGCATTGCTAAAGGCCTTCTTTATCTTCACGAGGATTCGCGTCTGCGTATTATTCATCGTGACCTTAAAGCAAGTAACATCCTTTTAGACGAAGAAATGAATCCGAAAATATCAGATTTTGGCATGGCAAGATTGTTTCTTGTGGATCAAACTCAAGGGAACACAAATAGAGTTGTTGGAACATATGGATACATGGCACCTGAGTATATAATGCAAGGACAATTCTCTGTGAAATCAGATGTCTTTAGTTTTGGCGTAATGGTTCTAGAGATAGTAAGTGGCCAGAAAAATAGTGGCTTCCACAAGGGAGAGGATGTGGAGGACCTAATAAGCTTTGCATGGAAAAATTGGAGGGACGGAACAGCATCAAACATTATAGATCACACAATGAATAATGGTTCAAGAAATGAAATACTGAGATGTATCCACATTGGTTTACTGTGTATTCAGGAAAATTTAGCTGATAGACCAAACATGGCTTCTATTGTGCTCATGCTTAACAGCCATTCTCTCACTCTTCCAGTGCCATCAAAGCCTCCATTTCTTGTGGACAGCAGAGGTTTATCAACTATTCCATCATGGGAGTATAGTTCAAGGGAAACTGATTGA 1965 0.4051 MAMAPSSSRVISLLLCLLFTLISHTTAQPSFLYHFCMNDKGNYTENSAYHTNLNTLLSTLSSNTEVDYGFYNFSQGQGSDKVNAIGMCRGDVKPESCRSCLNDSRVLLMHRCPNQKEAIGWYDNCMLRYSNRSIFDTMEPDPTYFLWVGINATDMNQFIQVLRNLLESLRTNASSGDSLKKYAAGSAAGPSFQTIFALLQCTPDLSEQECDDCLVRAISNINDRCYGLTKCRIGKPSCNLRFDTSPFYDSTADTSPPSPSKESPPPPVTNTNATSTKGKSNSTGIVIAVVVPIFVVLVLLISVCIFIRARKRKRSFHNHNDTEVNNEIEPIESLQFNFDTIRTATNNFSEENKLGRGGFGPVYKGKLSNGREIAVKRLSMNSGQGDTEFKNEVLLVAKLQHRNLVRLLGFCLERKERLLVYEFVPNKSLDYFIFDPIKRAHLDWEKRYKIIGGIAKGLLYLHEDSRLRIIHRDLKASNILLDEEMNPKISDFGMARLFLVDQTQGNTNRVVGTYGYMAPEYIMQGQFSVKSDVFSFGVMVLEIVSGQKNSGFHKGEDVEDLISFAWKNWRDGTASNIIDHTMNNGSRNEILRCIHIGLLCIQENLADRPNMASIVLMLNSHSLTLPVPSKPPFLVDSRGLSTIPSWEYSSRETD* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4231 654 MobiDBLite consensus disorder prediction 249 279 - -
Amo19g4231 654 Gene3D Phosphorylase Kinase; domain 1 308 423 - -
Amo19g4231 654 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 7 649 - -
Amo19g4231 654 Pfam Salt stress response/antifungal 36 131 IPR002902 -
Amo19g4231 654 Pfam Salt stress response/antifungal 153 244 IPR002902 -
Amo19g4231 654 SMART serkin_6 348 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4231 654 ProSiteProfiles Gnk2-homologous domain profile. 140 247 IPR002902 -
Amo19g4231 654 SUPERFAMILY Protein kinase-like (PK-like) 336 640 IPR011009 -
Amo19g4231 654 CDD STKc_IRAK 354 619 - -
Amo19g4231 654 Pfam TMEM154 protein family 269 318 IPR028064 -
Amo19g4231 654 ProSiteProfiles Gnk2-homologous domain profile. 31 134 IPR002902 -
Amo19g4231 654 Pfam Protein tyrosine and serine/threonine kinase 351 616 IPR001245 GO:0004672|GO:0006468
Amo19g4231 654 ProSiteProfiles Protein kinase domain profile. 348 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4231 654 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 7 649 - -
Amo19g4231 654 Gene3D Transferase(Phosphotransferase) domain 1 424 625 - -
Amo19g4231 654 Gene3D - 144 247 IPR038408 -
Amo19g4231 654 Gene3D - 28 133 IPR038408 -
Amo19g4231 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4231 Amo-Chr19 159030535 159033618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4231 9 652 Receptor kinase-like Gene Family AT4G21410 50.530 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo19g4231 PK_Tyr_Ser-Thr 5.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4231 - - gmx:102662291 994.956