Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4206 ATGTCTTTTCTTAAACTCATATTATTCAACTACCTTTGCTTCTTTCTCACTCTCATCACCACCTTCAATTTATCCAACCTCCAAACCCTTCTCACCTCCCTCTCTTCCCACGCGGCCACCGCCGGCTTCTACAACGCCACCGCCGGCGGCGGCCACCCGAACGAAACAATCTATGGGATGTACATGTGCCGCGGTGACGTCAGCAACCAGACATGCCAAGAGTGCGTAGAAACAGCAAAGCAGGAAATAGGGTCAAGGTGTGGGAATAACTCGAAAGAAGGCATAATTTGGTACCACCAATGCTTCCTTCGCTACTCGAATCGTTCGTTCTTCTCTACCTTGGATGAGTGGCCTCGCCTTGAGTACATCGTTCACAACAATGGCAGCAATCCGGGCAATGAAGGAAGCTACGGGTGGTTGTTGGCGAGCACGTTGAACGAGGCAATTGAAGAGGCGAAGAGCAAGATGAAGAAATTTGCAACAAAACACGCGAGCTTGAATGGTTCTAAGAATGTATATACACTTGTTCAGTGCACTCCGGATCTGTGGAGAGAAGATTGCAGTAAGTGTTTGAATGATTTAATGAAGGATATTCCTATGTGCTGTTTGGGAACCGATGGTGGGATGGTTGTTTCTCCAAGCTGCAATTTGATGTTCGGATTACGCCAATTTTACTCCAATGTTACTATTCCTACCACCTGGAATTCACTACCTAATTCTAGACTTGGTAAATATCAAACTAAGCTTTCAGGAGAACCAAGTGGCAGAAGAAGATTAAAGATTATCATAGCGTCTACTGTTCCTATTGTTGCTTTCTTGATGCTTTATTTCTTTGGCTATCATTTCCGGCGGATAAATGCTCTGCGGCGTTATAAGGCTATCCTTAAAGAAAATTTTGGAAACGAAAGTAAAGGTGGATTCGGAGAAGTTTACAAGGGTATTCTTTCTGATGGACGAGAAATAGCGGTAAAAAGATTGTCAATAACTTCCGAGCAAGGCATTGCAGAATTTAAGAATGAAGTTTTGCTGATAGCTAAACTTCAACACAGAAATCTTGTTGCATTATTGGGATTTTGCTTACAAGAAGGAGAGAAAATACTTATTTATGAATTTGTTCCTAACAAGAGCCTAGACTACTTTTTATTCGGTTCTGAACTGCATAGGCTATTAAGTTGGTGTGAGAGATTTAAAATTATAGGCGGAATTGCTAGAGCAATTCTTTATTTACATGAGTATTCTCGCCTCAAAATTATACACCGTGATATCAAACCTAGTAATATTTTATTAGATGCCAACATGAATCCTAAAATTTCAGATTTTGGCATGGCAAGAATGGTTGCTATTGATCAAGATCAAGGACGAACACAATATGCTATGTTAGGAAAATATTCGGAAAAATCTGATATCTTCAGTTTTGGAGTTATGATTTTGGAAATTGTTAGTGGCAAAAAAAATTCAAGTTCTTATGACTCTTACTACAACGATGGTCTCTTGAGTCATGCTTGGAAGCAATGGAGAGATGGGACACCATTTGAAATACTGGACCCAAATCTACATGAATCATGTTCTCAAATGGAAGTGATTAGATGCATCCAAGTTGGTTTACTATGTGTTCAAGAAAATCCTAATGATAGGCCACAAATGGCAGAAGTAGTTTCATATCTAAGTAACCTCTGCATTGAGTTGCCATTTCCTCGCGAGCCTGCTTTTTTTGTACATGGTAGAATGAATCCAAATATGGTCGCAGTAGAAGTTGATTTAGGACACCTAAGCAATAGTTCCACTCAACATTCACTCAACGAAATAACCCTAACACTAACAGTACTTTTGACTTCAGAACATGCCTCAGCTTCTGTTTTCGATTCAGTCAACTGCACAACCAACTCCACCTTCGCTCCAAACAGCACCTTCGACGTCAACCTCAGCACACTCTTCTCATATCTTACTTCCAACGTCACCAACGGCAACAATCTCAGGTTCTTCAACGCAACTGCAGGCTCTCACGGTTCAGACGCCGCCGTCTACGGCCTCTTCATGTGCCGCGGTGACGTGCCACTTGCACTGTGCCGAGAGTGCGTCGGTTTCGCAGCGCAGAACATAGCCTCGTCGTGTCCTTCTGCTAAAGAGGCTGTCATCTGGTACAACGAGTGCTTGTTACGCTACTCCAACAGATTCTTCTTCTCCACCATGGACGAATGGCCAAGGTACCAGATCAAGATCCCGTTGGGGGACCCTGTGGTTTTGCACAGCAAAGGTTTCTACAGTGCTTTAGGGTCCATATTCAATGGGATTGGAAATGAAGCAGCGTTGGCTCTTAGCGGTTCTGATAACAAGTATGCAGTGAAGCAAGCCGCCGCCACTGCCACCACCACAGTGTACGGTCTTGCTCAGTGCACGCCGGACCTCTCAGCCGCTGACTGCAAGCGGTGTATCGTGGACGCGGCGGCTGAATTTCCAAGGACTTGCTGCGGCGGGAGCATAGGGGGAAGTGTTATGTTTCCAAGTTGCATTGTTAGGTATGAAACGTACCCGTTTTATCAGCATTCAGGTACCTCCGGGACATTAACAACAACTAATAAGGTTAGGCCTGATATGAGTGCCTCAGAGTCTTTGGAATTTGATTTGGATACAATTCAATTCGCAACAAACAATTTTTCTCAAGGGAGCAGGATAGGCAAAGGAGGGTATGGAGAAGTCTACAAGGGAATTCTTCCTAGCGGAGAAGAAATAGCAGTGAAGAGGCTCTCAAGAAATTCTGGACAGGGGGTGGAGGAGTTCAAGAATGAAGTATTGTTGATAGCTAAACTTCAGCACAGGAATTTGGTGAGGTTAATGGGATTCTGCCTCGAAGATCAAGAGAGTATACTTATCTATGAATATGTACCTAACAAGAGCCTTGATCACTTCCTATTTGATCCCTCCAAGCGAAGAGAATTAACTTGGTCGCAACGTTATAAAATCATAAAAGGAATTGTTCGAGGAATTCTTTATCTTCACGAAGATTCTCGTCTCATGATAATACATCGAGACCTCAAACCAAGCAATGTTCTACTAGATAATCACATGAATCCCAAAATTTCTGACTTTGGAATGGCGAGGATAGTAGATACAGATCACATCCAAGGATGTACTAACAGAGTTGTGGGCACATATGGTTATATGTCTCCGGAATATGCAATGCATGGACAATTTTCAGTAAAATCAGATGTTTTTAGTTTTGGAGTCATGGTGCTTGAGATTATAAGTGGAAAGAAGAATTCTTCTTCTTTTGATTCATGTCGTATTGACGACCTCTTGAGTTATGCATGGAAACTGTGGAATAGTGATGAATCAGTATTTCAATTGCTGGATCCAGTTCTGCAAGAATCTTATAATCCAAATGAAGTTGAAAGATGTATTCAGATTGGATTATTGTGTGTACAAGAAAATCCAGATGAGAGGCCTACAATGGGGACCATAGCTTCATATCTTACAAATGATTCAGTTGAAATGCCATATCCTCAGGAACCAGCATTTTTCATGAAAGGAAGGACAAGAAGGCATGCATCTGGACATGAATCACATTCATCAGGTCACACCACCAAATATTCTTTCTCATCCTCTGTAAATGAGATGCCTACAACTGCTTTCTTCCCTCGATAG 3642 0.4231 MSFLKLILFNYLCFFLTLITTFNLSNLQTLLTSLSSHAATAGFYNATAGGGHPNETIYGMYMCRGDVSNQTCQECVETAKQEIGSRCGNNSKEGIIWYHQCFLRYSNRSFFSTLDEWPRLEYIVHNNGSNPGNEGSYGWLLASTLNEAIEEAKSKMKKFATKHASLNGSKNVYTLVQCTPDLWREDCSKCLNDLMKDIPMCCLGTDGGMVVSPSCNLMFGLRQFYSNVTIPTTWNSLPNSRLGKYQTKLSGEPSGRRRLKIIIASTVPIVAFLMLYFFGYHFRRINALRRYKAILKENFGNESKGGFGEVYKGILSDGREIAVKRLSITSEQGIAEFKNEVLLIAKLQHRNLVALLGFCLQEGEKILIYEFVPNKSLDYFLFGSELHRLLSWCERFKIIGGIARAILYLHEYSRLKIIHRDIKPSNILLDANMNPKISDFGMARMVAIDQDQGRTQYAMLGKYSEKSDIFSFGVMILEIVSGKKNSSSYDSYYNDGLLSHAWKQWRDGTPFEILDPNLHESCSQMEVIRCIQVGLLCVQENPNDRPQMAEVVSYLSNLCIELPFPREPAFFVHGRMNPNMVAVEVDLGHLSNSSTQHSLNEITLTLTVLLTSEHASASVFDSVNCTTNSTFAPNSTFDVNLSTLFSYLTSNVTNGNNLRFFNATAGSHGSDAAVYGLFMCRGDVPLALCRECVGFAAQNIASSCPSAKEAVIWYNECLLRYSNRFFFSTMDEWPRYQIKIPLGDPVVLHSKGFYSALGSIFNGIGNEAALALSGSDNKYAVKQAAATATTTVYGLAQCTPDLSAADCKRCIVDAAAEFPRTCCGGSIGGSVMFPSCIVRYETYPFYQHSGTSGTLTTTNKVRPDMSASESLEFDLDTIQFATNNFSQGSRIGKGGYGEVYKGILPSGEEIAVKRLSRNSGQGVEEFKNEVLLIAKLQHRNLVRLMGFCLEDQESILIYEYVPNKSLDHFLFDPSKRRELTWSQRYKIIKGIVRGILYLHEDSRLMIIHRDLKPSNVLLDNHMNPKISDFGMARIVDTDHIQGCTNRVVGTYGYMSPEYAMHGQFSVKSDVFSFGVMVLEIISGKKNSSSFDSCRIDDLLSYAWKLWNSDESVFQLLDPVLQESYNPNEVERCIQIGLLCVQENPDERPTMGTIASYLTNDSVEMPYPQEPAFFMKGRTRRHASGHESHSSGHTTKYSFSSSVNEMPTTAFFPR* 1214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4206 1213 ProSiteProfiles Protein kinase domain profile. 885 1157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4206 1213 Gene3D Transferase(Phosphotransferase) domain 1 961 1166 - -
Amo19g4206 1213 Gene3D Transferase(Phosphotransferase) domain 1 373 562 - -
Amo19g4206 1213 MobiDBLite consensus disorder prediction 1178 1200 - -
Amo19g4206 1213 ProSiteProfiles Gnk2-homologous domain profile. 734 845 IPR002902 -
Amo19g4206 1213 SUPERFAMILY Protein kinase-like (PK-like) 871 1188 IPR011009 -
Amo19g4206 1213 CDD STKc_IRAK 891 1159 - -
Amo19g4206 1213 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 20 296 - -
Amo19g4206 1213 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 303 581 - -
Amo19g4206 1213 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 601 857 - -
Amo19g4206 1213 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 863 1191 - -
Amo19g4206 1213 ProSiteProfiles Gnk2-homologous domain profile. 619 726 IPR002902 -
Amo19g4206 1213 SMART serkin_6 296 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4206 1213 SMART serkin_6 885 1157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4206 1213 SUPERFAMILY Protein kinase-like (PK-like) 304 577 IPR011009 -
Amo19g4206 1213 CDD STKc_IRAK 303 558 - -
Amo19g4206 1213 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1006 1018 IPR008271 GO:0004672|GO:0006468
Amo19g4206 1213 Gene3D - 618 726 IPR038408 -
Amo19g4206 1213 Gene3D - 17 110 IPR038408 -
Amo19g4206 1213 Gene3D - 120 224 IPR038408 -
Amo19g4206 1213 Gene3D - 747 845 IPR038408 -
Amo19g4206 1213 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 296 - -
Amo19g4206 1213 Pfam Salt stress response/antifungal 625 723 IPR002902 -
Amo19g4206 1213 Pfam Salt stress response/antifungal 136 219 IPR002902 -
Amo19g4206 1213 Pfam Salt stress response/antifungal 753 843 IPR002902 -
Amo19g4206 1213 Pfam Salt stress response/antifungal 25 107 IPR002902 -
Amo19g4206 1213 Pfam Protein kinase domain 886 1153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4206 1213 ProSitePatterns Serine/Threonine protein kinases active-site signature. 417 429 IPR008271 GO:0004672|GO:0006468
Amo19g4206 1213 Coils Coil 142 162 - -
Amo19g4206 1213 ProSitePatterns Protein kinases ATP-binding region signature. 891 913 IPR017441 GO:0005524
Amo19g4206 1213 Gene3D Phosphorylase Kinase; domain 1 848 960 - -
Amo19g4206 1213 Pfam Protein tyrosine and serine/threonine kinase 304 555 IPR001245 GO:0004672|GO:0006468
Amo19g4206 1213 ProSiteProfiles Gnk2-homologous domain profile. 4 110 IPR002902 -
Amo19g4206 1213 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 303 581 - -
Amo19g4206 1213 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 601 857 - -
Amo19g4206 1213 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 863 1191 - -
Amo19g4206 1213 Gene3D Phosphorylase Kinase; domain 1 303 372 - -
Amo19g4206 1213 ProSiteProfiles Gnk2-homologous domain profile. 119 224 IPR002902 -
Amo19g4206 1213 ProSiteProfiles Protein kinase domain profile. 296 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4206 Amo-Chr19 158737471 158746385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4206 24 573 Receptor kinase-like Gene Family AT4G05200 41.554 3.24e-143 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo19g4206 Pkinase 3.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4206 - - gsj:114402116 1438.32