Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4202 ATGAGCTCCTTAATTGGTTTTCGTTATGAACAAAGAAACATGCATTCGTTTCTCTTATTCCAGTTTCTGCTGCTACTCTCCATCACATGGTTTTGTTCTTCTTCTACAACTACTTCACCAGATACCAATTTCCCACATGTCTGTAACTGCACAAGAAACAGCACCTTTGAGTTAAACAWCACCTACCATACCAACCTCAAAACTCTTRTSTCTTGGCTTTCTTCCAATGCCACTAACTCTGCCGGATCCCACATCACCAAGGTTTCTTCTGGTAACAGCAGTGTCTATGGCCTCTTCCAGTGCAATGCAGATATAACTTCAGAGAAATGCCAAAAGTGCATCGATCAGGCAGTGTATAATGTAACATCAGAGTGTGAAACATCAAAGGAAGCTGTGGTATTTGTCAGATTCTGCTTCCTACGTTACTCTTACAGAGATTTCTTAACCATAGCAGAAGAAAGCCCTAAAATCTTCTTGCTGAACCTCAAGGACTACGTTGGCCAACTTGCTACGTTCAACAATGAAGTGTCGGAGATGATGTATACTCTGAGGCATAAGGTTGCTGATATTCCCATGGGTTCTAGAAGGTTCGCGTACGGGGAACTCAACATCACAGCTAAACAAAGCCTTTATGGCATGGCAAAGTGCACCCCGGACTTGCCCCCTGAGGAATGCAGCTCGTGTCTTGTGAACGCCGCGGCCGACATTCCGACCGGTTGTTGCAAAGGAAAGATCGGAGGAAGGGTTCTTTTTCCCAGTTGTGGCGTTAGATTTGAGCTTTATCGATTTTATGAGCCATCATCTCATCTCAATATTTTGAGACTTGGAGGAAATAGGAAAAACAGGTCACACCAGAGACAGATTATTATTTCCATCATCTCAACTGTTGTTTCTGTGCTGCTGCTATGTTTTGGCTGCTCTTTATGTTTCCTAAGTCGACGACGACAAAGGAAGCTTCTTAGGGGAATTCTTCTTAGAGAAAGCTTTGGGGATGAATCATTGGCTTCTTTTGAGTCTTTACAATTTCAGTTGAGTGAAATTCAAGCTGCTACCAACAACTTCTCCCAAGGAAACAAGATAGGAAGAGGTGGATTTGGGGAAGTTTACAAGGGTGTTCTTGAAAATGGGCAAGAAGTAGCAGCAAAGAGACTCTTGGGAAACTCTTGGCAAGGTGCAGAAGAATTTAAGAATGAGGTTCTTGTTATGGCCAAGCTTCAACATAAAAATCTGGTCAGATTACTGGGGTTTTGTTTGGAAGGACAAGAGAGGATACTTGTCTATGAATATGTCCCCAACAAGAGCCTTGACTACATTTTATTTGATCCTCAGAGAAGCAGGCCATTAACTTGGTCTGAACGATACAAWATTATTAGAGGAATTGCGCGAGGYATTTTATACCTTCATGAAGATTCTCGTTTYACYATCATCCATCGAGATCTTAAACCAAGTAATATTTTATTAGACGATAGTATGAATCCAAAAATATCAGATTTTGGTATGGCAAGAATAGTAATTACAGATCAAATTCAAGTGAATACTCATAGGTTAAATCATATATACAGTGGTTATATGTCTCCAGAATATGCAATGGAAGGAATGTTTTCAATAAGATCTGACGTGTATAGTTTTGGAATCATAGTACTTGAGATTATTAGTGGAAAATCGAAAAGTTCTTTTTGTGAATCACACTTCTCAGATGACATCCGACTTTCTGCATGGGCAAAATGGAAGGAAGAAAAGCCATTGGAATTATTGGATACAACTTTAAAAGGAAATTATTCTGAAAATGAAGTGATGAGAAGTATACAGATTGCACTGTTATGTGTTCAAGATGATCCAAATGAGAGGCCTACAATGACAGAAATTGTGTCATACCTCAATAGTTCTTCAGGGGAAGTACCTTTGCCTCAAGAACCAATAWTTTCAAAYAGTAAAAAGATGGATTATATGTCTTACTACCACAAAACGCATTCCATAAATGATTCTATCAACGATTTGTCAGTGAGCACATTTCTCCCTAGATAA 2025 0.3941 MSSLIGFRYEQRNMHSFLLFQFLLLLSITWFCSSSTTTSPDTNFPHVCNCTRNSTFELNXTYHTNLKTLXSWLSSNATNSAGSHITKVSSGNSSVYGLFQCNADITSEKCQKCIDQAVYNVTSECETSKEAVVFVRFCFLRYSYRDFLTIAEESPKIFLLNLKDYVGQLATFNNEVSEMMYTLRHKVADIPMGSRRFAYGELNITAKQSLYGMAKCTPDLPPEECSSCLVNAAADIPTGCCKGKIGGRVLFPSCGVRFELYRFYEPSSHLNILRLGGNRKNRSHQRQIIISIISTVVSVLLLCFGCSLCFLSRRRQRKLLRGILLRESFGDESLASFESLQFQLSEIQAATNNFSQGNKIGRGGFGEVYKGVLENGQEVAAKRLLGNSWQGAEEFKNEVLVMAKLQHKNLVRLLGFCLEGQERILVYEYVPNKSLDYILFDPQRSRPLTWSERYXIIRGIARGILYLHEDSRFTIIHRDLKPSNILLDDSMNPKISDFGMARIVITDQIQVNTHRLNHIYSGYMSPEYAMEGMFSIRSDVYSFGIIVLEIISGKSKSSFCESHFSDDIRLSAWAKWKEEKPLELLDTTLKGNYSENEVMRSIQIALLCVQDDPNERPTMTEIVSYLNSSSGEVPLPQEPIXSNSKKMDYMSYYHKTHSINDSINDLSVSTFLPR* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4202 674 CDD STKc_IRAK 360 627 - -
Amo19g4202 674 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 41 674 - -
Amo19g4202 674 ProSiteProfiles Gnk2-homologous domain profile. 153 263 IPR002902 -
Amo19g4202 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Amo19g4202 674 Pfam Protein tyrosine and serine/threonine kinase 356 626 IPR001245 GO:0004672|GO:0006468
Amo19g4202 674 SMART serkin_6 354 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4202 674 ProSitePatterns Protein kinases ATP-binding region signature. 360 382 IPR017441 GO:0005524
Amo19g4202 674 Gene3D Transferase(Phosphotransferase) domain 1 430 637 - -
Amo19g4202 674 ProSiteProfiles Gnk2-homologous domain profile. 43 147 IPR002902 -
Amo19g4202 674 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 41 674 - -
Amo19g4202 674 Pfam Salt stress response/antifungal 48 143 IPR002902 -
Amo19g4202 674 Pfam Salt stress response/antifungal 170 261 IPR002902 -
Amo19g4202 674 Gene3D Phosphorylase Kinase; domain 1 324 429 - -
Amo19g4202 674 ProSiteProfiles Protein kinase domain profile. 354 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4202 674 SUPERFAMILY Protein kinase-like (PK-like) 339 654 IPR011009 -
Amo19g4202 674 Gene3D - 43 147 IPR038408 -
Amo19g4202 674 Gene3D - 160 263 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4202 Amo-Chr19 158666992 158669619 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4202 25 637 Receptor kinase-like Gene Family AT4G05200 46.288 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo19g4202 PK_Tyr_Ser-Thr 2.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4202 - - adu:107467162 1216.06