Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4180 ATGGGTAGCCTTGAGGCCGAAAGGACAACTGTTGGATGGGCAGCTAGAGACCCTTCTGGTGTTCTTTCTCCATACACATACCCTCTCAGAGACACGGGCCCCGATGATGTTTACATCAAAGTTCACTACTGTGGACTCTGCCATTCCGATCTCCACCAAATTAAAAACGATCTTGGCATGTCCAATTACCCTATGGTCCCTGGCCACGAAGTCGTAGGGGAGGTTCTCGAGGTTGGCTCCAACGTTACGAGGTTCAAAGTGGGTGAGATCGTGGGAGCGGGACTCCTCGTTGGTTGCTGCAAAACCTGCTCTGCATGCGAATCTGATGTAGAGAATTACTGCAGCAAGAAGATCTGGTCTTACAACGATGTTTACGTTGATGGAAGACCCACTCAGGGTGGCTTCGCTGAAACCATGATCGTTGAGCAAAAGTTTGTTGTGAAGATACCAGAAGGCATGGAGCCAGAGCAAGTTGCGCCATTGTTGTGTGCAGGTGTGACTGTGTACAGTCCACTGGCGCACTTTGGGTTGAAGAAGAGTGGTCTGAGAGGTGGAATATTGGGGCTTGGTGGAGTTGGACACATGGGTGTGAAGATCGCAAAGGCACTGGGTCACCACATCACTGTTATAAGCTCTTCTGATAAGAAGAAGAAAGAAGCACTTGAGGATCTTGGTGCTGATAGCTACTTGGTTAGCTCTGATTCTTCAAGCATGCAAGAAGCTGCTGATTCACTTGATTACATCATTGACACTGTCCCTGTTGGACACCCTCTTGAACCTTATCTGTCTCTTCTCAAGCTTGATGGCAAGTTGATCTTGATGGGTGTCATCAACACCCCTCTTCAATTCGTTAGCCCTATGGTCATGCTTGGGAGGAAATCAATCACGGGAAGTTTCATTGGGAGCATGAAGGAGACCGAGGAGATGCTGCAATTCTGGAAGGAGAAGGGACTGAGTTCCATGATTGAGATTGTGAACATGGATTATATCAACACAGCAGTGGAAAGACTGGAGAAGAACGATGTGAGATACAGGTTTGTTGTGGATGTTAAAGGAAGCAAGCTTGATCAGTGA 1074 0.4777 MGSLEAERTTVGWAARDPSGVLSPYTYPLRDTGPDDVYIKVHYCGLCHSDLHQIKNDLGMSNYPMVPGHEVVGEVLEVGSNVTRFKVGEIVGAGLLVGCCKTCSACESDVENYCSKKIWSYNDVYVDGRPTQGGFAETMIVEQKFVVKIPEGMEPEQVAPLLCAGVTVYSPLAHFGLKKSGLRGGILGLGGVGHMGVKIAKALGHHITVISSSDKKKKEALEDLGADSYLVSSDSSSMQEAADSLDYIIDTVPVGHPLEPYLSLLKLDGKLILMGVINTPLQFVSPMVMLGRKSITGSFIGSMKETEEMLQFWKEKGLSSMIEIVNMDYINTAVERLEKNDVRYRFVVDVKGSKLDQ* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4180 357 CDD CAD1 11 349 - -
Amo19g4180 357 Pfam Zinc-binding dehydrogenase 191 312 IPR013149 -
Amo19g4180 357 SUPERFAMILY GroES-like 16 181 IPR011032 -
Amo19g4180 357 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 154 318 IPR036291 -
Amo19g4180 357 SMART PKS_ER_names_mod 20 348 IPR020843 GO:0016491
Amo19g4180 357 Gene3D - 13 350 - -
Amo19g4180 357 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Amo19g4180 357 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 4 357 - -
Amo19g4180 357 Pfam Alcohol dehydrogenase GroES-like domain 34 149 IPR013154 -
Amo19g4180 357 PANTHER ALDEHYDE REDUCTASE 4 357 - -
Amo19g4180 357 Gene3D - 164 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4180 Amo-Chr19 158347691 158349330 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4180 1 355 Monolignol Biosynthesis Gene Families AT3G19450 76.966 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4180 K00083 - gmx:100777558 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4180 19 158347691 158349330 Amo19g4180 19 158347691 158349330 ECH