Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4175 ATGGCCACGTTTTCCATTGGGACACACACGCACTTGTGCATGTTCCACCATTTCCGGAACTCTAGGCTCTCACTTCATCGTCTTCACTCTCTTCAATCCTCGCCCCCCTCTCTCTGTAGAATCAGAGGGCCCAGCTTGCTCCGTAATCATGTCTTGGCGCGTGCAGAAGATAAGGCCAGAGGTTCCTCCACTTCTTCCCAGCAGCAGTTCCAGGACTTACCAACTGAATCTGGAACCTGTGATCCCCTATGTTCACTTGATGAAACAAGCTCACAAGATTTTGAGAGCAGTTACAAGCCCAAGACCGATTTGCTCAAAGCTGTTGCGGTATTTGCAGCAGCTGCAACTGGGGCAGTGGCAATTAACCATTCTTGGGTGGCCGCAAATCAGGATCTTGCCATGGCATTGCTATTTGTAATAGGATATGTAGGCATCATATTTGAGGAATCTCTAGCTTTCAACAAAAGTGGAGTAGGACTTTTGATGGCTGTAAGCTTGTGGACTATAAGAAGTATTGGGGCTCCATCAACTGGTGTAGCTGTTTCTGAGCTAACGCGTGCGTCTGCGGAAGTCAGTGAAATAGTGTTTTTCTTGCTTGGAGCTATGACTATTGTGGAAATAGTTGATGCTCATCAAGGATTTAAGCTAGTTACTGACAATATAACAACTCGAAAGCCACGACTTCTCCTTTGGGTGATTGGATTTGTGACATTTTTTCTCAGTTCAGTTTTAGACAACCTTACCTCTACAATAGTCATGGTTTCTCTGTTGCGGAAATTAGTACCCCCATCAGAGTATCGAAAGATTCTTGGAGCCGTTGTTGTAATAGCTGCAAATGCTGGTGGTGCATGGACTCCTATTGGTGATGTTACCACCACTATGCTGTGGATACATGGTCAAATATCTACAGTGCAAACAATGAAGGGTTTGTTTGTACCTTCAGCCATTTCTCTAGCTGTTCCATTGGCGCTCATGTCCCTGACTAGCGAAGTGAATGGGAAGGGACAGGATTCTCCAAATGTCTTGGCTTCCGAACAGATGGCTCCTCGAGGACAGCTTGTTTTCTCAGTTGGTTTAGGGGCTTTGATTTTTGTCCCCGTGTTCAAGGCCCTCACAGGTTTGCCTCCGTACATGGGGATGCTACTTGGACTTGGTGTCCTTTGGATCCTCACTGATGCTATTCATTACGGTGAATCAGAAAGACAAAGGCTAAAAGTGCCGCAGGCTCTGTCAAGAATAGACACTCAAGGAGCTCTATTCTTCCTGGGAATTCTATTGTCTGTTAGCAGCCTGGAGGCAGCAGGAATCCTTCGTGAAATAGCGAATTACCTTGATGCTCATATCCAGAGCAGTGAACTGATTGCAAGTGCCATTGGGGTCATATCGGCAATAATTGACAACGTTCCATTGGTTGCTGCTGCAATGGGAATGTATGATCTTGCATCTTTCCCTCAGGATTCTGAGTTCTGGCAACTGATTGCATTCTGTGCCGGTACTGGTGGGTCCATGTTAGTTATTGGCTCGGCTGCCGGCGTTGCATTCATGGGGATGGAGAAGGTGGATTTCTTTTGGTACTTACGGAAGGTTAGTGGCTTTGCTTTTGCGGGATATGCTGCCGGTATTGCTGCTTATTTAGCATTACATAATCTCAACATATCCCTGCCTACAACTCTAGCAGAGGTTCCTTTCCTTTCTGGTTCATAA 1704 0.4613 MATFSIGTHTHLCMFHHFRNSRLSLHRLHSLQSSPPSLCRIRGPSLLRNHVLARAEDKARGSSTSSQQQFQDLPTESGTCDPLCSLDETSSQDFESSYKPKTDLLKAVAVFAAAATGAVAINHSWVAANQDLAMALLFVIGYVGIIFEESLAFNKSGVGLLMAVSLWTIRSIGAPSTGVAVSELTRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRLLLWVIGFVTFFLSSVLDNLTSTIVMVSLLRKLVPPSEYRKILGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTVQTMKGLFVPSAISLAVPLALMSLTSEVNGKGQDSPNVLASEQMAPRGQLVFSVGLGALIFVPVFKALTGLPPYMGMLLGLGVLWILTDAIHYGESERQRLKVPQALSRIDTQGALFFLGILLSVSSLEAAGILREIANYLDAHIQSSELIASAIGVISAIIDNVPLVAAAMGMYDLASFPQDSEFWQLIAFCAGTGGSMLVIGSAAGVAFMGMEKVDFFWYLRKVSGFAFAGYAAGIAAYLALHNLNISLPTTLAEVPFLSGS* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4175 567 Pfam Citrate transporter 142 498 IPR004680 GO:0016021|GO:0055085
Amo19g4175 567 MobiDBLite consensus disorder prediction 59 76 - -
Amo19g4175 567 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 1 567 IPR045016 GO:0006814|GO:0015297
Amo19g4175 567 MobiDBLite consensus disorder prediction 57 76 - -
Amo19g4175 567 PANTHER BNAC03G40960D PROTEIN 1 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4175 Amo-Chr19 158262055 158265565 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4175 1 567 Antiporters AT3G19490 77.604 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4175 - - gmx:100779521 874.004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4175 19 158262055 158265565 Amo19g4175 19 158262055 158265565 ECH