Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4159 ATGGTGGCTTTTGGCGGGAAAAAGATGCGCCAAATGGTTGTTGGCTTCGGTGGAAGTGGCATCGGCCAGGTCGTTGCCGCCGTCGCCGTTTCCTTCCTCCTCCGCCTGTTCACTTCTCCCGGTCCCGCACTCCCTCCGGACGATGAAGATAATGACGGCGGCTACGAGGTGCCGGAGAACGGCATCCACGACGCGGAAGCTCCGCCTTCCGGAAAGGTTACGCCGGTTACAATCCGATGGAACAACATCAATTGCTCCCTTTCCGATAAATCGTCCAAGTCCGTGAGGATTTTGCTGAAAAATGTGAGTGGAGAAGCAAAACCTGGAAGGTTGCTAGCTATAATGGGGCCTTCGGGTTCAGGGAAGACAACTCTGCTTAATGTTCTTGCAGGCCAGTTGGCAGCATCGCCTCGGTTGCATTTGTCAGGCCGTTTGGAGTTCAATGGAAAGCCTAGTTCAAGGAACACTTACAAGTTTGCTTATGTGAGGCAGGAGGATCTCTTCTTCTCACAACTCACTGTTCGGGAAACATTGTCTCTTGCTATAGAACTCCAGCTTCCCCACATTTCATCTGCAGAAGAGAGAGATGAATACGTGAACAATCTCCTTTTCAAACTAGGCTTGGTCAGTTGTGCTGATACCAATGTTGGTGATGCGAAAGTTCGTGGAATCAGTGGTGGTGAAAAGAAACGCTTATCCTTGGCATGTGAATTACTTGCAAGCCCATCTGTTATATTTGCTGATGAACCCACAACAGGACTTGATGCCTTCCAAGCTGAGAAAGTCGTGGAAACTCTTCAACAACTTGCCCAAGATGGTCATACTGTAATTTGCTCTATACATCAGCCAAGAGGTTCAGTGTACAGTAAATTCGATGACATTGTCTTGCTAACAGAGGGTTCACTTGTGTATGCTGGTCCTGCCCATGATGAACCATTGGCATACTTCTCAAAATTTGGGTACCACTGCCCTGATCATGTGAATCCTGCTGAATTTTTGGCTGATCTTATATCTGTAGACTACAGTTCTGCTGATAGTGTTTATTCCTCTCGAAAAAGGATCGATGGTCTTGTCGAGTCATTCTCGCAAAGGCTATCTACATCTTTTATAATATATGCAACTCCAATTACTGTAGATGAGCTCTCAAAAAGTAGAAAGAAAATCAGTAGGAGGACTATTGTGCAGAAGAAAGGAGGTTGGTGGAAGCAATTTTGGTTGCTTCTTAGGCGAGCATGGATGCAGGCTTCCCGAGATGTACCAACAAACAAAGTTCGAGCAAGGATGTCAATAGCATCAGCAATTATCTTCGGTTCAGTTTTCTGGAGAATGGGAAATTCCCAGACTTCAATACAAGACAGAATGGGATTACTTCAGGTAGCCGCAATAAATACAGCTATGGCAGCTCTCACAAAGACTGTTGGTGTATTTCCAAAGGAACGCGCCATTGTTGATAGAGAACGTGCAAAAGGCTCCTATTCTTTGGGTCCCTATCTGTTCTCAAAATTGTTAGCAGAGATTCCGATTGGAGCCTCATTTCCATTGATGTTTGGTGCTGTTTTATACCCAATGGCTCGTCTTCATCCTACTTTGCTCAGATTTGGGAAATTCTGTGGAATTGTCACCATGGAGTCTTTTGCTGCATCTGCAATGGGTCTCACTGTTGGTGCTATGGTTCCAACCACCGAAGCTGCAATGGCGGTAGGCCCATCTCTTATGACAGTTTTTATTGTATTTGGAGGCTACTATGTCAATCCTGAGAATACCCCCATCATCTTCCGTTGGATTCCCAGCGTTTCTCTAATTAGATGGGCCTTCCAAGGACTTTGCATCAATGAATTTAGTGGTCTTCAATTTGAGCATCAGAATTCTTTTGACATTCAAACTGGAGAACAGGCACTTGAGCGCCTTTCCTTTGGAAAAAGTAGGATTAGTGATACAGTGTTAGCACAAAATAGAATACTGTTCTTCTGGTATTGCACCACCTACCTTCTCCTTGAGAAAAACAAGCCTAAATTCCAGCAACTTGAGCCAATCCCACTTGAACAAAACAAAACACACTTCAAACTCGAGGAATTAAACCCTGAACAAGTTGATCAGACACTTGAATCTCAACCTGTCAGCCAAGATGGATCCAACCAGCCTCTTGAGTCACCTGAAGTGGATCCTATTGGTCCATTTGTCTTAGAAGGTACTAAGTAA 2199 0.4497 MVAFGGKKMRQMVVGFGGSGIGQVVAAVAVSFLLRLFTSPGPALPPDDEDNDGGYEVPENGIHDAEAPPSGKVTPVTIRWNNINCSLSDKSSKSVRILLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLAASPRLHLSGRLEFNGKPSSRNTYKFAYVRQEDLFFSQLTVRETLSLAIELQLPHISSAEERDEYVNNLLFKLGLVSCADTNVGDAKVRGISGGEKKRLSLACELLASPSVIFADEPTTGLDAFQAEKVVETLQQLAQDGHTVICSIHQPRGSVYSKFDDIVLLTEGSLVYAGPAHDEPLAYFSKFGYHCPDHVNPAEFLADLISVDYSSADSVYSSRKRIDGLVESFSQRLSTSFIIYATPITVDELSKSRKKISRRTIVQKKGGWWKQFWLLLRRAWMQASRDVPTNKVRARMSIASAIIFGSVFWRMGNSQTSIQDRMGLLQVAAINTAMAALTKTVGVFPKERAIVDRERAKGSYSLGPYLFSKLLAEIPIGASFPLMFGAVLYPMARLHPTLLRFGKFCGIVTMESFAASAMGLTVGAMVPTTEAAMAVGPSLMTVFIVFGGYYVNPENTPIIFRWIPSVSLIRWAFQGLCINEFSGLQFEHQNSFDIQTGEQALERLSFGKSRISDTVLAQNRILFFWYCTTYLLLEKNKPKFQQLEPIPLEQNKTHFKLEELNPEQVDQTLESQPVSQDGSNQPLESPEVDPIGPFVLEGTK* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4159 732 MobiDBLite consensus disorder prediction 696 715 - -
Amo19g4159 732 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 78 310 IPR027417 -
Amo19g4159 732 Pfam ABC-2 type transporter 281 338 IPR043926 GO:0140359
Amo19g4159 732 CDD ABCG_EPDR 75 306 - -
Amo19g4159 732 PANTHER ABC TRANSPORTER G FAMILY MEMBER 7 1 681 - -
Amo19g4159 732 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1 681 - -
Amo19g4159 732 ProSitePatterns ABC transporters family signature. 224 238 IPR017871 GO:0005524
Amo19g4159 732 Pfam ABC transporter 99 251 IPR003439 GO:0005524
Amo19g4159 732 MobiDBLite consensus disorder prediction 43 71 - -
Amo19g4159 732 Gene3D - 71 314 IPR027417 -
Amo19g4159 732 MobiDBLite consensus disorder prediction 692 732 - -
Amo19g4159 732 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 78 324 IPR003439 GO:0005524
Amo19g4159 732 Pfam ABC-2 type transporter 403 613 IPR013525 GO:0016020|GO:0140359
Amo19g4159 732 SMART AAA_5 108 301 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4159 Amo-Chr19 158101148 158107206 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4159 84 318 Calmodulin-binding Proteins AT2G36910 28.980 1.91e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4159 K05681 - gmx:100788256 1256.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4159 19 158101148 158107206 Amo19g4159 19 158101148 158107206 ECH