Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4156 ATGGGACGGTCATCTCCTAATGACAAATTATTGCTTGTGCAAGCATTGAGGAGGAAGGGACATGTTGTGGCTGTAACTGGGGATGGAACAAATGATGCTCCTGCACTACATGAGGCTGATATAGGTTGTGGATGGGGACGTTCTGTGTATGCAAATATTCAGAAATTTATCCAGTTTCAGCTTACAGTAAATGTAGCAGCTCTTGTTATAAATGTTGTTGCTGCTGTTTCCTCTGGTGATGTCCCACTGAATGCAGTGCAGCTTTTGTGGGTAAATCTTATCATGGATACTTTGGGAGCACTAGCATTGGCAACTGAACCACCAACTGATCACCTTATGGCAATGTACCAAGTATCTGTGTTGCTTGTTCTGAATTTCCGAGGTAGGAGCATACTGGGTCTGACACATGACAAAAATGATCATGCAATTAAAGTGAAAAACACTCTGATCTTCAATGCATTTGTTCTGTCTCAAATCCGCGAGTTCACTTCAACAGTCAGGCTTAATTGGAAGCAGTGGCTGATCTCTGTCATCATTGGGTTCATAAGTTGGCCTCTTGCTGTGGTTGGTAAATTGATACCAGTTCCAAATACTCCCATCAACAATGTATTTTCAAGATTTCGGGGTTGA 630 0.4222 MGRSSPNDKLLLVQALRRKGHVVAVTGDGTNDAPALHEADIGCGWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMAMYQVSVLLVLNFRGRSILGLTHDKNDHAIKVKNTLIFNAFVLSQIREFTSTVRLNWKQWLISVIIGFISWPLAVVGKLIPVPNTPINNVFSRFRG* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4156 209 Gene3D - 43 119 - -
Amo19g4156 209 Pfam Cation transporting ATPase, C-terminus 81 113 IPR006068 -
Amo19g4156 209 SUPERFAMILY HAD-like 3 48 IPR036412 -
Amo19g4156 209 Gene3D - 3 42 IPR023214 -
Amo19g4156 209 SUPERFAMILY Calcium ATPase, transmembrane domain M 46 195 IPR023298 -
Amo19g4156 209 PANTHER CATION TRANSPORTING ATPASE 45 113 - -
Amo19g4156 209 PANTHER CATION TRANSPORTING ATPASE 161 205 - -
Amo19g4156 209 PANTHER CATION TRANSPORTING ATPASE 113 159 - -
Amo19g4156 209 PANTHER CATION TRANSPORTING ATPASE 1 42 - -
Amo19g4156 209 PANTHER CALCIUM-TRANSPORTING ATPASE 45 113 - -
Amo19g4156 209 PANTHER CALCIUM-TRANSPORTING ATPASE 161 205 - -
Amo19g4156 209 PANTHER CALCIUM-TRANSPORTING ATPASE 113 159 - -
Amo19g4156 209 PANTHER CALCIUM-TRANSPORTING ATPASE 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4156 Amo-Chr19 158075234 158076020 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4156 1 202 Primary Pumps ATPases AT5G57110 57.239 7.84e-97 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4156 K01537 - gmx:100820121 324.709