Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4116 ATGGCCTCCGGTGAAGGGAGGCGTCGTCACCATGATCTTGTGCCTCTTGCTGCATTGCTTAAGAGGGAGATGAAGAGTGAGAAGATGGAGAARCCCACTGTTAGATATGGTCATGCCGCTCAGTCTAAGAAAGGGGAAGATTACTTTCTAGTCAAGACTGATTGTCAGCGAGTACCCKGGAACYCTTCAACTTCSTTTTCTGTTTTTGCGATCTTTGATGGACACAATGGAAATGCTGCAGCCATTTTTGCTAGAGAGCATTTGTTAAATCATGTATTGAGTGCTCTTCCTCGAGGGCTTGGMCGAGATGAGTGGTTGCAAGCTTTGCCTAGGGCATTGGTTGCTGGATTTGTTAAGACTGATAAGGAATTTCAGAGCAGAGGAGAAACTTCTGGAACCACAGCTACGTTTGTGATAGTGGATAGGTGGACTGTGACAGTTGCATCTGTTGGAGATTCCCGTTGTATACTAGATACACARGGTGGTGCTGTTACCACCTTAACGGTTGATCACAGACTYGAAGAAAATATTGAAGAGAGGGAACGTGTTACTGCAAGTGGAGGTGAAGTTGGGAGGCTTAGCATTGTTGGTGGTGCTGAGATTGGTCCTCTTCGTTGCTGGCCTGGGGGTCTATGCCTTTCAAGGTCAATAGGAGATATGGATGTTGGGGAGTTCATAGTTCCAGTACCATATGTCAAACAAGTGAAGCTATCAAATGCTGGTGGTAGGCTTGTAATTGCTTCTGATGGCATCTGGGATGCCGTGTCCTCCGAAGTGGCTGCTAAATCTTGTCGTGGTTTGCCTGCTGAACTTGCGGCTACGCAGGTTGTGAAGGTAAACTATAGTGGTATATGCTATTTTGGATAA 867 0.4591 MASGEGRRRHHDLVPLAALLKREMKSEKMEKPTVRYGHAAQSKKGEDYFLVKTDCQRVPXNXSTSFSVFAIFDGHNGNAAAIFAREHLLNHVLSALPRGLGRDEWLQALPRALVAGFVKTDKEFQSRGETSGTTATFVIVDRWTVTVASVGDSRCILDTQGGAVTTLTVDHRLEENIEERERVTASGGEVGRLSIVGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPVPYVKQVKLSNAGGRLVIASDGIWDAVSSEVAAKSCRGLPAELAATQVVKVNYSGICYFG* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4116 288 Gene3D - 33 282 IPR036457 -
Amo19g4116 288 SUPERFAMILY PP2C-like 30 278 IPR036457 -
Amo19g4116 288 PANTHER ALPHABET, ISOFORM E-RELATED 2 278 - -
Amo19g4116 288 Pfam Protein phosphatase 2C 61 265 IPR001932 -
Amo19g4116 288 ProSiteProfiles PPM-type phosphatase domain profile. 28 288 IPR001932 -
Amo19g4116 288 SMART PP2C_4 27 277 IPR001932 -
Amo19g4116 288 CDD PP2Cc 36 278 IPR001932 -
Amo19g4116 288 PANTHER PROTEIN PHOSPHATASE 2C 15-RELATED 2 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4116 Amo-Chr19 157598783 157602012 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4116 1 278 PP2C-type Phosphatase Gene Family AT1G68410 81.625 8.73e-170 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4116 - - gmx:100779571 531.946