Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4112 ATGGCGGCAACAAGTCACCTCGTTGCTCATGCTACCTTGTTCCTCTCTCTGGTTTTTCACATGCATCTTCTGGTTAGCGGCTCTACCAGCCAAGATATGGAGGCTCTTTTGGCCTTCAAAGCTGGTTCAGACGCGTCGGAGAAGCTAACGAGTTGGAACAACAGCACCAACCTGTGCAGCTGGGACGGTGTCTCCTGCATCAACAACCGAGTCACGCGACTCGTTCTGGAGAACCTCGACCTCCAAGGTTCCATTCAATCCTTAACTTCACTCACTCAACTGCGAGTTCTCAGCCTCAAGCGAAACCGTTTCTCTGGAACCCTTCCYTCTCTCTCTAACTTCACCGCCCTCAAGCTTCTCTTCCTCTCTTACAACCACTTCTCCGGTGACTTTCCAGCCACAGTGACCTCTCTCTTCCGCCTCTATCGTCTCGATCTGTCCCACAAYAACCTCTCCGGCGAGATTCCGGCGACAGTCAACCACTTAGCCCACCTTCTCACTCTCCGTCTCGAGGAGAACCGTTTCTCTGGCTACATTCCTGGCGTCAACCTCCCAAACCTGCAAGACTTCAACGTCTCCGGGAACCTCCTCTCCGGCGAGATACCGAAGTCGCTCTCGGCTTTCCCCGTATCCTCGTTCGGGCAAAACCCTTCTCTCTGCGGAGCCCCGATTCAGAACTGCACCGGAGTGGTGCCTGACCCTACAAAACCCGGATCCGAGGGCGCCATTGCGTCCCCAGTGGTGCCACGTGGCGGCGCCACAACAACAGTGTCATCTTCCCCGAGTTCAATGCCAGCAAATGACGGTGGAGCAGCTCCAAAAACMWCGAAAACACATAGAAACGGAGGTTCGAAGATAAGCCCGGTGGCTCTAATAGCCATAATTGTGGGCGATGTATTGGTACTGGGCATTGTGTCATTGCTTCTATATTGCTACTTCTGGAGGAACTACTCGGCGAAGTTGAAGGAAGGGAAAGGRTCAAAGCTTTTCGAGAGCGAGAAGATTGTGTATTCTTCGAGTCCGTACCCTGCACAAGGAGGAGGAGGAGGGTTTGAGAGGGGGAAAATGGTGTTCTTCGAAGGCGAGAAGAGGTTCGAATTGGAGGACTTGCTTCGAGCGTCTGCTGAGATGCTGGGAAAAGGTGGGTTCGGAACGGCGTACAAAGCGGTTCTTGATGATGGGAACGTTGTTGCGGTGAAGAGGCTGAAAGATGCGCAGATTGGAGGGAAGAGAGAGTTCGAGCAGCACATGGAGCTTCTTGGAAGGTTGAGGCATCAGAATATCGTGAGCTTGAGGGCTTACTATTTTGCCAGAGACGAGAAGTTGTTGGTCTACGATTACATGCCCAATGGAAGCTTGTTCTGGCTCCTTCATGGGAACCGAGGACCGGGGAGAACCCCACTGGACTGGACCACTCGGCTCAAGATAGCAGCTGGAGCGGCGCGTGGCGTGGCCTTCATTCACAACTCGTGTAAGTCCCTCAGGCTCAACCACGGTAACATCAAATCCACCAACATTCTCTTAGACAAGCAGGGAAATGCCCGGGTATCAGATTTTGGGCTGTCCGTGTTCGCGGGCCCAGGCCCATCAACATCTGGTGTCAGATCCAACGGCTATCGTGCTCCCGAGGTGTCATCTGACGGTCGAAAACAGTCCCAAAAGTCTGACGTGTACTCGTTCGGTGTATTCTTGCTTGAGTTGCTGACGGGGAAGTGCCCCTCGGCGGTGGAGGGTGGTGGTGCGCCCGCGGTGGACCTGCCAAGGTGGGTCCAGTCCGTTGTGAGGGAGGAATGGACCGCTGAGGTATTTGATTTGGAGCTGATGAGGTACAAGGACATTGAAGAGGAGATGGTTGGGCTGTTGCAGGTTGCTATGGCGTGCACTGCCCCTGCACCTGATCAACGGCCTAGCATGAGCCACGTGGTCAAGATGATCGAGGAGTTGCGTGGGGTGCAGGTGTCACCGTGTCATGACACGTTGGACTCTGTGTCTGAGTCACCTTCCGTCTCCGAAGATGCATGTGGAGCTAGTCAGTGA 2037 0.541 MAATSHLVAHATLFLSLVFHMHLLVSGSTSQDMEALLAFKAGSDASEKLTSWNNSTNLCSWDGVSCINNRVTRLVLENLDLQGSIQSLTSLTQLRVLSLKRNRFSGTLPSLSNFTALKLLFLSYNHFSGDFPATVTSLFRLYRLDLSHNNLSGEIPATVNHLAHLLTLRLEENRFSGYIPGVNLPNLQDFNVSGNLLSGEIPKSLSAFPVSSFGQNPSLCGAPIQNCTGVVPDPTKPGSEGAIASPVVPRGGATTTVSSSPSSMPANDGGAAPKTXKTHRNGGSKISPVALIAIIVGDVLVLGIVSLLLYCYFWRNYSAKLKEGKGSKLFESEKIVYSSSPYPAQGGGGGFERGKMVFFEGEKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGNVVAVKRLKDAQIGGKREFEQHMELLGRLRHQNIVSLRAYYFARDEKLLVYDYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGVAFIHNSCKSLRLNHGNIKSTNILLDKQGNARVSDFGLSVFAGPGPSTSGVRSNGYRAPEVSSDGRKQSQKSDVYSFGVFLLELLTGKCPSAVEGGGAPAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQVAMACTAPAPDQRPSMSHVVKMIEELRGVQVSPCHDTLDSVSESPSVSEDACGASQ* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4112 678 Pfam Protein kinase domain 376 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4112 678 MobiDBLite consensus disorder prediction 231 280 - -
Amo19g4112 678 Pfam Leucine rich repeat N-terminal domain 31 66 IPR013210 -
Amo19g4112 678 Gene3D Phosphorylase Kinase; domain 1 352 447 - -
Amo19g4112 678 ProSitePatterns Protein kinases ATP-binding region signature. 378 400 IPR017441 GO:0005524
Amo19g4112 678 PANTHER - 27 664 - -
Amo19g4112 678 SUPERFAMILY L domain-like 50 222 - -
Amo19g4112 678 Gene3D Ribonuclease Inhibitor 25 87 IPR032675 -
Amo19g4112 678 Gene3D Ribonuclease Inhibitor 88 231 IPR032675 -
Amo19g4112 678 MobiDBLite consensus disorder prediction 251 266 - -
Amo19g4112 678 Gene3D Transferase(Phosphotransferase) domain 1 448 663 - -
Amo19g4112 678 CDD STKc_IRAK 378 648 - -
Amo19g4112 678 ProSiteProfiles Protein kinase domain profile. 372 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4112 678 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 27 664 - -
Amo19g4112 678 MobiDBLite consensus disorder prediction 657 678 - -
Amo19g4112 678 SUPERFAMILY Protein kinase-like (PK-like) 376 645 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4112 Amo-Chr19 157550795 157553622 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4112 32 677 Receptor kinase-like Gene Family AT1G68400 67.275 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Amo19g4112 Pkinase 1.2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4112 - - adu:107467433 1308.89