Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4088 ATGCCCAGCTCTCCCTTAGGTTATGCATACGCCAAATTCAATACAACAGTATTCAGATGCCCTCCCAATAATCTGACCCTTCCTCAGTCATTTTTTAACTATACAAACTGCCCTAACTACCACATCTACTATGATGGCCTTCCAAGTGACGGAGATTCTCCTCACTTTAGCAGCATGTTCCAGATGGAAGTACAATTATCTAGTGATTGTAGAAACTGTAATGATCACAGAAGAGGACACTGCCAACTTGACACCCAAGGAAACTTCCTTTGCGTCACAGTTGCTACAGTTCTAGTGCTAGTAGTAATGGTCACGATCTACTACACAAGATGGAAGAAGGAAAATCCTAAACAGATGCTGGTGGTTGATGCCTTTTTGGAGAAACATGGGCCCCTTCAAATAAGGAGATATACTTATTCAGAGATGAAGAAGGTGACCAACTCTTTCAGAGACAAACTAGGCCAAGGAGGATTTGGCAGTGTATACAAAGGACAATTGCAGGACGGACGCCATGTTTCAGTGAAGATCCTAAGTGAACTGAAAGGTGACGGTAAAGATTTCATCAATGAAGTTGCGAGTATGAGCAGAACTTCTCACGTTAACATTGTGGCTCTTCTTGGCTTCTGCTTTCAAGGTTCCAAACGAGCTTTGGTTTATGACTTTATGCCCAATGGATCGCTTGAGAAGTTAATCTATGAAGAACATACTGTGATAGGAGATCACCAATTGGATTGCCAAACTTTATATGATATTGCAATTGGTGTTGCTCGAGAACTTGAATATTTGCACACAGGCTGCAATACTAGAATCTTGCATTTTGACAATAAAGCCTCATAA 837 0.4122 MPSSPLGYAYAKFNTTVFRCPPNNLTLPQSFFNYTNCPNYHIYYDGLPSDGDSPHFSSMFQMEVQLSSDCRNCNDHRRGHCQLDTQGNFLCVTVATVLVLVVMVTIYYTRWKKENPKQMLVVDAFLEKHGPLQIRRYTYSEMKKVTNSFRDKLGQGGFGSVYKGQLQDGRHVSVKILSELKGDGKDFINEVASMSRTSHVNIVALLGFCFQGSKRALVYDFMPNGSLEKLIYEEHTVIGDHQLDCQTLYDIAIGVARELEYLHTGCNTRILHFDNKAS* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4088 278 Gene3D Transferase(Phosphotransferase) domain 1 222 278 - -
Amo19g4088 278 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 3 53 - -
Amo19g4088 278 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 57 276 - -
Amo19g4088 278 Gene3D Phosphorylase Kinase; domain 1 124 221 - -
Amo19g4088 278 SUPERFAMILY Protein kinase-like (PK-like) 130 276 IPR011009 -
Amo19g4088 278 Pfam Protein tyrosine and serine/threonine kinase 149 264 IPR001245 GO:0004672|GO:0006468
Amo19g4088 278 ProSiteProfiles Protein kinase domain profile. 147 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4088 278 PANTHER RUST RESISTANCE KINASE LR10-RELATED 3 53 IPR045874 GO:0004672
Amo19g4088 278 PANTHER RUST RESISTANCE KINASE LR10-RELATED 57 276 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4088 Amo-Chr19 157263121 157264326 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4088 91 276 Receptor kinase-like Gene Family AT5G38260 50.000 1.31e-54 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo19g4088 PK_Tyr_Ser-Thr 9.3e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4088 - - gmx:100786495 311.227