Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4083 ATGTTTGTTGTTCATGTGATAGCTGAGAGTAGTGAAAAGTGTCCAACCTCTTTTGAGTGTGGGAAACTTGGCACCATCATGTTCCCTTTCACTGACTCAAAACGGCCTCACTGTGGCGTATTGGCCATACACGGCTGCCATGATAACAATAATCCAAACGGCCAGCAAGTCATAGTATTAAACAACAAACCAAATGGAAGGTTTCTTGTTTTATACATTGACTTTCATACCATAACCATAACCGATTTGCCTCTACGTACCTCTTTGAAATCCCAATCGCAGACGCAGCGTTGTAAAGCCTTCAGCAACAATTTGAGTCTGCCTCTCATGCCCAGCTCCCCCTTCGGTTATTCATACGCCAAATTCAATAAAACACTATTCACATGTCCTTCCAATAACCTCACCCTTCCTCCCGGATTTTATAACTATAACAACTGCTCTAACTACCACATCTACTATGATGGCTTTCAAAGTCTCGGAGATTCTCCTGACTTACGGTGGCCAGGCCCTTTAGCAGCATGTTCCAAGATTAATTTTGCATTAAAAGCCGAATCAAATGATAGAGACCCCTTCTCATTTCTGTCTGATGAGATCGTGTTGGAAGTAGAATTATCCAGTGATTGTAGAAACTGTATTCGTCACAGAAGAGGACACTGTCAACTTGACTCCCAAGGAAACTTCCTTTGCGTCACAGACGCAGGTCATATTAGTTGGATCGTGAAGATGGGACTGGGACTGGTTGCTACAGTTCTAGTGCTAGTAGTAATGGCCACGCTCTACTGCACAACATGGAAGAAGGAAAATCCTAAACAAATGCTGGTGGTTGATGCCTTTTTGGAGAAACAAATAAGGAGATATACTTATTCAGAGATGAAGAAGGTGACCAACTCTTTCAGAGACAAACTAGGCCAAGGAGGATTTGGCAGTGTATACAAAGGACAATTGCAGGACGGACGCCATGTTGCAGTGAAGATCCTAAGTGAACTGAAAGGTGATGGTGAAGATTTCTTCAATGAAGTTGCGAGTATGAGCAGAACTTCTCATGTTAACATTGTTGCTCTTCTTGGCTTCTGCTTTCAAGGTTCCAAACGAGCTTTGGTTTATGAATTTATGCCCAATGGGTCGCTTGAGAAGTTAATCTATGAAGAAAATACTGTGATAGGGGATCACCAATTGGATTGTCAAACTTTATATGATATTGCAATTGGTGTTGCTCGAGGGCTTGAGTATTTGCACACGGGCTGCAATACAAGAATCTTGCATTTTGACATAAAGCCCCATAACATTCTCTTAGATGAAAATTTTTGTCCCAAAATTTCAGATTTTGGACTTGCAAAAGTTTGCACTAGAAAAGAAAGTATTGTATCAATATTTGGTGCTAGAGGAACTGCAGGCTATATTGCTCCAGAAGTATTTTCTAAGAATTTTGGTGCAGTATCTCACAAGTCAGATGTTTATAGTTATGGAATGATGGTTTTAGAAATGGTTGGACGAAGGAGGAATATCAAAGTTGAAGTTGACGCATCTAGTGAGTTATATTTCCCTCATTGGATATATAATCGCCTTGTGTCAAATCAAGAACTTGGTTTGCGAAGTATAAGAAATGAGTGGGAAAATGAGATGGTAAGAAAGATGACAATAGTGAGCTTATGGTGCATTCAAACCAACCCTTCAAGTCGACCATCAATTAGTAAAGTGGTGGAAATGCTGGAAGGAAGAGCTGAGTTGTTGCAAGTGCCCCCTAAACCATTTTGGTTTTCTCCTTCAACATCTCCCTGA 1779 0.4081 MFVVHVIAESSEKCPTSFECGKLGTIMFPFTDSKRPHCGVLAIHGCHDNNNPNGQQVIVLNNKPNGRFLVLYIDFHTITITDLPLRTSLKSQSQTQRCKAFSNNLSLPLMPSSPFGYSYAKFNKTLFTCPSNNLTLPPGFYNYNNCSNYHIYYDGFQSLGDSPDLRWPGPLAACSKINFALKAESNDRDPFSFLSDEIVLEVELSSDCRNCIRHRRGHCQLDSQGNFLCVTDAGHISWIVKMGLGLVATVLVLVVMATLYCTTWKKENPKQMLVVDAFLEKQIRRYTYSEMKKVTNSFRDKLGQGGFGSVYKGQLQDGRHVAVKILSELKGDGEDFFNEVASMSRTSHVNIVALLGFCFQGSKRALVYEFMPNGSLEKLIYEENTVIGDHQLDCQTLYDIAIGVARGLEYLHTGCNTRILHFDIKPHNILLDENFCPKISDFGLAKVCTRKESIVSIFGARGTAGYIAPEVFSKNFGAVSHKSDVYSYGMMVLEMVGRRRNIKVEVDASSELYFPHWIYNRLVSNQELGLRSIRNEWENEMVRKMTIVSLWCIQTNPSSRPSISKVVEMLEGRAELLQVPPKPFWFSPSTSP* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4083 592 PANTHER RUST RESISTANCE KINASE LR10-RELATED 6 592 IPR045874 GO:0004672
Amo19g4083 592 ProSitePatterns Protein kinases ATP-binding region signature. 302 324 IPR017441 GO:0005524
Amo19g4083 592 Gene3D Transferase(Phosphotransferase) domain 1 371 582 - -
Amo19g4083 592 SMART serkin_6 296 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4083 592 Pfam Protein kinase domain 300 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4083 592 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 6 592 - -
Amo19g4083 592 Gene3D Phosphorylase Kinase; domain 1 259 370 - -
Amo19g4083 592 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
Amo19g4083 592 SUPERFAMILY Protein kinase-like (PK-like) 279 571 IPR011009 -
Amo19g4083 592 ProSiteProfiles Protein kinase domain profile. 296 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4083 Amo-Chr19 157234990 157237308 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4083 244 584 Receptor kinase-like Gene Family AT4G18250 54.986 9.93e-128 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo19g4083 Pkinase 2.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4083 - - gmx:100784387 640.958