Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4082 ATGGCTCCCCTTCATTTCTTCCTCATCTTGTTTGCTCACTCAATTCGTCAAGCCAATGGGAACCATGAAAACTGTCCAAGCTCCTTTACTTGTGGAAATTTTGGGACTTTCCAGTACCCATTCACCATGGCAGAGCATCCTGAGTGTGGGTTGTTACCAATTCAAGGCTGCCTCCTCAATGCTACTTCACCAAAATTGATCCAACTTGGCAACAATAGCAAAAGCGTGAACCTTACTGCTGTAGTTGAGACCAATAAGATCATTACAATCTATGATGATGGTTTCCACACAAGTTTGGATCACAATGAATGCGACACTTTGCACAATAATTACACCCTTCCTCCACCTTCTCCATCTTTGTCTATGTATATCAAGTACAATGTAACTCTCTTCAAATGCAATCACAACCTTAGTACCAAGCCCCCTTCCAATTATGTTAATCTAGGATGCCGCGTCCCCTACGGCTATGAAATCTATTATGATAGAAACAACACCCACCCTGATCAAGAGGCCGCGGGAGTTTTTTCCGGCTGCTCAGTTGTCCAGTTTGCTTCAAAAGACTCCACCAATACCAAAGACGTTCTGTCCTTCGTTTCTGCTGAGATGACTCTTGAAATAGTGTTATCTCATGACTGTGATGACTGCTTCAATCACAGAGGAGGCCTTTGTGGAGTCGACAACAATAACCACTTCTACTGCCACAAAGGTAGTAGTGGTACAAACAGGCTTGTCAAAAAAATGGGACTCGCACTAGCACTGGCGATGACAGCTACTCTAGTTCTAGTAATAATGACGCTCTACTACAAAAGATGGAAGAAGCAAAATCCAACCCTTCCACTGGTTGATGCTTTTTTTGAGAGACATGACCACCTTCAAATCAAGAGGTATAGTTATTCTGAGATGAAGAAAGTGACCAATTCCTTCAAAAACAAACTAGGCCAAGGGGGGTTTGGCAGTGTATACAAAGGACAATTACAGGACGGACGCCATGTTGCAGTGAAGATCCTAAGTGAATTTAAAGGTGATGGTCAGGAGTTCATTAATGAAGTTGCAAGTATGAGCAGAACTTCTCATGTTAACATCGTTGCTCTTCTTGGCTTCTGCTTTGAAGGATCTAAGCGAGCTTTAGTTTACGAATTGATGCCTAATGGGTCTCTAGAGAAGTTAATTTATAATGAAAATGCTGTGATAGGGGATCGCCAATTGGATTGTCAAACTTTATATGATATTGCAATTGGTGTTGCCCGAGGACTTGAGTATTTGCACAAGGGCTGCAATACAAAAATCCTGCATTTTGACATAAAGCCTCATAACATTTTGTTAGATGAAAAATTCTGTCCCAAAATTTCTGACTTCGGACTTGCAAAAGTTTGCACAAGAAAAGAAAGTATAGTATCGATATTTGGTGCTAGAGGAACTGCAGGCTATATTGCCCCGGAGGTATTTTCTAGAAACTTTGGTGCAGTATCACATAAGTCAGATGTTTACAGTTATGGAATGATGGTCTTAGAAATGGTTGGAAGAAGAAAGAACATCAAGGCTGAAGTTGATGTATCTAGTGAGATATATTTCCCTCATTGGATATACAATCGCCTTGTGTCAAATCAGGAGCTTGATCTGCAAAACATAAGAAATGAATGTGATAATGAGATGGTCAGAAAGATGACAATAGTGAGTTTATGGTGCATTCAAACCAATCCTTCAACTCGACCATCAATCAGTAAGGTGGTGGAAATGTTGGAAGGAAGTGCTGAGTTGTTGCAATTGCCTCCTAAACCATATTGGTCAACAATGGCTGGCTGCATTCAACTATCGTCTCTCTTGCTCTTATTCTTCTTGTTGTTGCTTTCATGCAACAGCAACAGGGTATGGGGATGTCCACCTTCAATTCCGTGCGGAGATCTCGGCGATCTGCGTTTCCCATTCACCAGCAGACCTCACTCGGAGTGCGGCCTCCTGGTGATAGATGGCTGCCAAGATGATCCAGGCTCCACTAAAAGCATTCAGAACAACAACCGTTGGTTCAATATTCTCAACGGAAGCCTTACCCAGTCAAACATCACCGTCAGAGACGACGGTTTAGTGGTTTCACGATCTTCAATAACCATCAGAGACGACAATCTCTATACTCTCCTGTCATCAAGAAGCTGTGAGGTTTTGGGGTATGACTCTTCCAACACTTTCAGAATCGACACACCTTTGGCTTCCTCTCAGGTGATGTACTCAGCAAGCCTTCTGAAATGCAAACTTAGCATCGATCCAAGGCCTTCGTATGTTCTTCCAAACTCTACGGTATGTGGAATTAGAAACGATACGTTCTACGCAGTGAGTGACGCGTCCAAATACAAGGAGATCCAAGGGTGTTCATTGATTGAGCTTCCACTGGGTGGACCAATTCTGGTCCTCGAAGATCCCAACACCCTGCTAAGTTCCCTCACCGCTGATATTCCAATCCAAATAAACCTGTCTCCCAATTGTTCTCATTGTAACATTGCTTATGGAGGCCTATGCAGAATCGACAACTCCGGCAGGTTTTATTGTCACACACCTCGCAAAACGAGGAAGACGATTACAATAGCAGAGGTAAAGAAGGCAACCAACTCCTTCAAAGACAAACTGGGTCAAGGAGGTTATGGTAGCGTATACAAAGGGAAGTTATCTGATGGAACCCTTGTGGCAGTGAAGGTTTTAAGTGAATCAAAAGGTAATGGTGAAGAATTTATCAATGAAGTTGCTAGCATAAGTGTGACTTCTCATGTTAACATTGTTGAATTATTGGGATTCTGTTTGGAAGATACTAAAAGAGCTTTAATATACAAGTATATGCCTAATGGATCAGTTGAAAAATTTATTTATGAAGGCAGAGATTCAAAAACGTTCAATCCAAACTTGACTTGCAAAACAATGTATAAGATCGCAATTGGTGTTGCTCGAGGGTTAGACTATTTGCACAAAGGGTGTAACAGCAAAATTGTACATTTTGATATCAAACCTCACAATATCTTACTAGATGAGGATTTTTGTCCAAAGATTTCCGATTTTGGACTTGCAAAAATATGCATGGAAAAAGAAAGCATCCTATCATTAATGATTGCTAGAGGAACTATAGGTTATATTGCACCTGAAGTGTTCTCAAGGAATTTTGGTGAGGTGTCTCATAAATCCGATGTATATAGTTATGGAATGATGGTTTTAGAAATGATTGGAGAAAGAAAAAACAGGAACATTAAAGATGAATCTTCAAAACCTGAATTGCAATGTATCAAGAATGAAATTGATAAAGAAACGATACAGAAGATGATAGTAGTGAGCTTATGGTGCATACAAACTGACCCATCAAATAGACCAACAATGAGCAAGGTGGTAGATATGATGGAATCAACCTTTGAGTCTCTACAAATGCCACCAAAACCTTATCTATCTTCACCTCCTAGATCTTTCCCACTAGATTCAACAAATTCATCACTCTCAAAATGTAAGTCATTATGA 3489 0.4073 MAPLHFFLILFAHSIRQANGNHENCPSSFTCGNFGTFQYPFTMAEHPECGLLPIQGCLLNATSPKLIQLGNNSKSVNLTAVVETNKIITIYDDGFHTSLDHNECDTLHNNYTLPPPSPSLSMYIKYNVTLFKCNHNLSTKPPSNYVNLGCRVPYGYEIYYDRNNTHPDQEAAGVFSGCSVVQFASKDSTNTKDVLSFVSAEMTLEIVLSHDCDDCFNHRGGLCGVDNNNHFYCHKGSSGTNRLVKKMGLALALAMTATLVLVIMTLYYKRWKKQNPTLPLVDAFFERHDHLQIKRYSYSEMKKVTNSFKNKLGQGGFGSVYKGQLQDGRHVAVKILSEFKGDGQEFINEVASMSRTSHVNIVALLGFCFEGSKRALVYELMPNGSLEKLIYNENAVIGDRQLDCQTLYDIAIGVARGLEYLHKGCNTKILHFDIKPHNILLDEKFCPKISDFGLAKVCTRKESIVSIFGARGTAGYIAPEVFSRNFGAVSHKSDVYSYGMMVLEMVGRRKNIKAEVDVSSEIYFPHWIYNRLVSNQELDLQNIRNECDNEMVRKMTIVSLWCIQTNPSTRPSISKVVEMLEGSAELLQLPPKPYWSTMAGCIQLSSLLLLFFLLLLSCNSNRVWGCPPSIPCGDLGDLRFPFTSRPHSECGLLVIDGCQDDPGSTKSIQNNNRWFNILNGSLTQSNITVRDDGLVVSRSSITIRDDNLYTLLSSRSCEVLGYDSSNTFRIDTPLASSQVMYSASLLKCKLSIDPRPSYVLPNSTVCGIRNDTFYAVSDASKYKEIQGCSLIELPLGGPILVLEDPNTLLSSLTADIPIQINLSPNCSHCNIAYGGLCRIDNSGRFYCHTPRKTRKTITIAEVKKATNSFKDKLGQGGYGSVYKGKLSDGTLVAVKVLSESKGNGEEFINEVASISVTSHVNIVELLGFCLEDTKRALIYKYMPNGSVEKFIYEGRDSKTFNPNLTCKTMYKIAIGVARGLDYLHKGCNSKIVHFDIKPHNILLDEDFCPKISDFGLAKICMEKESILSLMIARGTIGYIAPEVFSRNFGEVSHKSDVYSYGMMVLEMIGERKNRNIKDESSKPELQCIKNEIDKETIQKMIVVSLWCIQTDPSNRPTMSKVVDMMESTFESLQMPPKPYLSSPPRSFPLDSTNSSLSKCKSL* 1163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4082 1162 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Amo19g4082 1162 ProSiteProfiles Protein kinase domain profile. 306 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4082 1162 SUPERFAMILY Protein kinase-like (PK-like) 290 581 IPR011009 -
Amo19g4082 1162 SUPERFAMILY Protein kinase-like (PK-like) 849 1125 IPR011009 -
Amo19g4082 1162 Pfam Protein kinase domain 309 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4082 1162 Pfam Protein kinase domain 870 1123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4082 1162 Gene3D Phosphorylase Kinase; domain 1 283 380 - -
Amo19g4082 1162 Gene3D Phosphorylase Kinase; domain 1 838 941 - -
Amo19g4082 1162 PANTHER RUST RESISTANCE KINASE LR10-RELATED 6 597 IPR045874 GO:0004672
Amo19g4082 1162 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 605 857 - -
Amo19g4082 1162 SMART serkin_6 867 1129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4082 1162 SMART serkin_6 306 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4082 1162 MobiDBLite consensus disorder prediction 1145 1162 - -
Amo19g4082 1162 MobiDBLite consensus disorder prediction 1134 1162 - -
Amo19g4082 1162 ProSitePatterns Protein kinases ATP-binding region signature. 873 895 IPR017441 GO:0005524
Amo19g4082 1162 ProSitePatterns Protein kinases ATP-binding region signature. 312 334 IPR017441 GO:0005524
Amo19g4082 1162 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 6 597 - -
Amo19g4082 1162 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 859 1146 - -
Amo19g4082 1162 Gene3D Transferase(Phosphotransferase) domain 1 381 596 - -
Amo19g4082 1162 ProSitePatterns Serine/Threonine protein kinases active-site signature. 991 1003 IPR008271 GO:0004672|GO:0006468
Amo19g4082 1162 Gene3D Transferase(Phosphotransferase) domain 1 942 1135 - -
Amo19g4082 1162 PANTHER RUST RESISTANCE KINASE LR10-RELATED 605 857 IPR045874 GO:0004672
Amo19g4082 1162 PANTHER RUST RESISTANCE KINASE LR10-RELATED 859 1146 IPR045874 GO:0004672
Amo19g4082 1162 ProSiteProfiles Protein kinase domain profile. 867 1129 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4082 Amo-Chr19 157214458 157233879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4082 6 593 Receptor kinase-like Gene Family AT5G38260 38.386 7.22e-127 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo19g4082 Pkinase 4.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4082 - - ahf:112709538 1066.22