Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4063 ATGCCCTCTGCTTCAGAGGTATATGCTGCAAGAGAGAAGAACAGAATCTATATACCACGTGATCGTTATCTTAGTGAAGAAGCAGAGAAGAAGGCCATGGCTGAAAAGATAGAACGCATGGAACTAGAGGCAGACTCTAAAGATAAGCAACTGATGGAGCTTTATCAACTTTACAATTGTCAGCAACTTTTGACTACACAGTTAAGTGATAAACTTGAAAAAACTGAGAAAAATCTGGAAGAAACTGAACGGTCATTAGTTGATCTTGAGGAAAGACAAAAACAAGCAAATGCAACAATAAAGGAAAAGGAATTAAGCAGTCAACAAGAATACSTGAAGCTGAAGGCACGTTATGAAGCCCTACAAAGGTCCCAGAGAAACCTGATGGGAGAAGATCTTGGCCTTCTAAGCAGCAAAGAGCTAGAGTCACTGGAAAGGCAGCTAGATTCGTCGTTGAAGCTAATCAGATCCACAAGGACCCAATTCATGCTGGATCAGCTATCGAAACTTCAACGTAAGACGTTTTCTCAACTTCAGGAAGAGAAAAGCTCCCTGCTCCAGGAAAAAATATATTTAACAAAGGTAATATTTATTTACAAGGACATGAACAATGAAAATGTTGAAATGATTTGTAGCAAATTTGTTGAGCATCTCTAG 657 0.3896 MPSASEVYAAREKNRIYIPRDRYLSEEAEKKAMAEKIERMELEADSKDKQLMELYQLYNCQQLLTTQLSDKLEKTEKNLEETERSLVDLEERQKQANATIKEKELSSQQEYXKLKARYEALQRSQRNLMGEDLGLLSSKELESLERQLDSSLKLIRSTRTQFMLDQLSKLQRKTFSQLQEEKSSLLQEKIYLTKVIFIYKDMNNENVEMICSKFVEHL* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4063 218 ProSiteProfiles K-box domain profile. 104 205 IPR002487 GO:0003700|GO:0005634|GO:0006355
Amo19g4063 218 PANTHER KINESIN-LIKE PROTEIN KIF11 5 173 - -
Amo19g4063 218 Coils Coil 111 111 - -
Amo19g4063 218 Coils Coil 65 106 - -
Amo19g4063 218 Coils Coil 23 57 - -
Amo19g4063 218 Coils Coil 113 131 - -
Amo19g4063 218 Pfam K-box region 103 187 IPR002487 GO:0003700|GO:0005634|GO:0006355
Amo19g4063 218 PANTHER KINESIN-LIKE PROTEIN KIN-5D 5 173 - -
Amo19g4063 218 Coils Coil 141 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4063 Amo-Chr19 156917460 156920209 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4063 104 173 MADS-box Gene Family AT1G24260 81.429 5.60e-30 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4063 K10398 - aip:107618448 387.882