Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4050 ATGCATGTGATTACAGTGGAAGGAATGGGAAGCTGCAAGAGAGTTTTCATTTCCATCGCTGGGTTGGTATTATTTTCATTCCTTATCGGGAATATGCAGACATATTTGCAATCAACAACAACAACATTAGAGGAGATGAGGGTGAAAAGGAGAGATGCAGAATACCAGATGTCTCATAGACTCCTCCCTGACAGCCTTAGGCAGCAAATCAGACAATATGAGCAGTACAAATGGCAAGAAACCAGAGGTGTTGATGAGGATAACTTGATTTGCAATCTTCCAAAGGATTTGAGAAGGGACATTAAGCGCCATCTTTGCTTGGCTTTGCTGATGAGAGTTTGCTGCCAATGCACTTAG 357 0.423 MHVITVEGMGSCKRVFISIAGLVLFSFLIGNMQTYLQSTTTTLEEMRVKRRDAEYQMSHRLLPDSLRQQIRQYEQYKWQETRGVDEDNLICNLPKDLRRDIKRHLCLALLMRVCCQCT* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4050 118 Gene3D Helix hairpin bin 41 106 - -
Amo19g4050 118 SUPERFAMILY cAMP-binding domain-like 44 113 IPR018490 -
Amo19g4050 118 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 11 114 - -
Amo19g4050 118 PANTHER BNAC09G29350D PROTEIN 11 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4050 Amo-Chr19 156718219 156721632 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4050 12 113 Ion Channels AT5G53130 87.255 8.11e-58 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4050 K05391 - ahf:112712077 229.18