Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4027 ATGGGACTTCAACTCAAGAAACCAGTCTTTTACACTAGTATTATTACACTAGCACTTACCTTAATTACAAAACTCTTGTGTTGTCAACTTTCTATTCCTTTCCCTTCCTCRAATTTCGTTGTTGCTRTTGCCACTCTTGTGTTTACGTTGTTCCTATAYTTGAACAAGAACTCTTCTACCACACTCCCTCCAGGGCCTCTCTCTGTTCCTATATTTGGAAATTGGTTACAAGTTGGCAATGATCTCAACCACCGTCTTCTAGCTTCATACTCACAAMACTATGGCCCCGTTTTCCTTCTCAAACTTGGTTCCAAGAACTTGGTTGTGGTATCTGATCCAGAACTTGCCACCCAAGTCCTCCAYTCACAAGGTGTTGAATTCGGCTCTCGCCCTCGAAACGTTGTGTTTGATATCTTCACTGGCAATGGACAAGACATGGTGTTCACTGTTTATGGTGATCATTGGCGCAAGATGCGSAGGATAATGACCCTGCCATTTTTCACCAACAAGGTTGTCCATAACTACAGCAACATGTGGGAAGAAGAGATGGATTTGGTGGTGCATGATCTCAATGGWAATGTTGAGAAAGTGAGGAGCGAAGGGATAGTTATCAGAAGGAGGCTTCAGCTGATGCTGTATAACATCATGTATAGAATGATGTTTGATGCAAAGTTTGAGTCTCAAGAGGACCCTTTGTTCATTWAGGCTACCAAGTTTAACTCTGARAGAAGCCGTTTGGCACAGAGCTTTGAGTACAACTATGGAGATTTTATACCTCTGCTTAGACCCTTCTTGAGGGGCTACCTCAACAAGTGCAAGGACTTGCAAACTAGGAGGTTGGCATTTTTCAACAACTATTACATTGAGAAAAGGAGAAATATAATGGCTGCTAATGGAGAAAAGCACAAGATAAGCTGTGCAATTGATCACATCATAGATGCTGAGATGAAGGGAGAAATAAGTGAAGAAAATGTGCTTTACATTGTAGAGAACATAAATGTTGCAGCAATAGAGACAACACTGTGGTCAATGGAGTGGGCAATAGCAGAGTTGGTGAACCATCCAGAAGTCCAAAGAAAGATTCGTGATGAGATATCAAAAGTGCTTAAAGACCAAACAGTTACAGAATGTAACCTGCATGAACTGCCATATCTACAAGCCACAGTGAAAGAGACACTAAGACTTCACACCCCAATTCCTCTACTTGTGCCACACATGAACCTTGAGGAAGCAAATCTAGGAGGGTACAAGATTCCAAAGGAGTCCAAGGTGGTAGTGAATGCATGGTGGCTTGCAAATAACCCTGCATGGTGGAAGAAWCCTCAAGAGTTTAGGCCAGAGAGGTTCTTGGAAGAGGAGAGTGAGACAGAAGCAGTGGCTGGAGGGAAGGTTGATTTCAGRTTCTTGCCATTTGGTGTTGGAAGGAGGAGTTGCCCTGGGATCATTCTTGCAATGCCAATTCTGGCTTTGATCATTGCAAAGTTGGTAACAAACTTTGACATGAAACCTCCAAATGGATCAAACAAGATTGATGTCACTGAAAAAGGAGGCCAATTCAGCTTGCACATTGCTAACCATTCCACTGTTTCTTTTCATCCAATTAATTAG 1608 0.4198 MGLQLKKPVFYTSIITLALTLITKLLCCQLSIPFPSSNFVVAXATLVFTLFLYLNKNSSTTLPPGPLSVPIFGNWLQVGNDLNHRLLASYSQXYGPVFLLKLGSKNLVVVSDPELATQVLHSQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGDHWRKMRRIMTLPFFTNKVVHNYSNMWEEEMDLVVHDLNGNVEKVRSEGIVIRRRLQLMLYNIMYRMMFDAKFESQEDPLFIXATKFNSERSRLAQSFEYNYGDFIPLLRPFLRGYLNKCKDLQTRRLAFFNNYYIEKRRNIMAANGEKHKISCAIDHIIDAEMKGEISEENVLYIVENINVAAIETTLWSMEWAIAELVNHPEVQRKIRDEISKVLKDQTVTECNLHELPYLQATVKETLRLHTPIPLLVPHMNLEEANLGGYKIPKESKVVVNAWWLANNPAWWKXPQEFRPERFLEEESETEAVAGGKVDFRFLPFGVGRRSCPGIILAMPILALIIAKLVTNFDMKPPNGSNKIDVTEKGGQFSLHIANHSTVSFHPIN* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4027 535 PRINTS E-class P450 group I signature 324 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4027 535 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4027 535 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4027 535 PRINTS E-class P450 group I signature 386 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4027 535 PRINTS E-class P450 group I signature 427 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4027 535 PRINTS E-class P450 group I signature 115 136 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4027 535 PRINTS E-class P450 group I signature 468 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4027 535 PRINTS E-class P450 group I signature 344 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4027 535 PRINTS E-class P450 group I signature 478 501 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4027 535 PRINTS P450 superfamily signature 469 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4027 535 PRINTS P450 superfamily signature 335 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4027 535 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4027 535 SUPERFAMILY Cytochrome P450 63 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4027 535 Pfam Cytochrome P450 63 523 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4027 535 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 471 480 IPR017972 GO:0005506|GO:0016705
Amo19g4027 535 Gene3D Cytochrome P450 54 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g4027 535 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 15 534 - -
Amo19g4027 535 PANTHER OS02G0467000 PROTEIN 15 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4027 Amo-Chr19 156365135 156367109 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4027 72 535 Monolignol Biosynthesis Gene Families AT2G30490 64.592 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4027 K00487 - gmx:100812188 890.182