Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4025 ATGGCTGCTCTTGCATCAAGCCTAAGCCTTAGTCCACAATACAGAACAAGAAGCAAAGAATATCAACAACATCATCATGGTTCTGTTGTTGAGGAAATCAAAGGGCTTATTAGAGTTCACAAAGATGGATACATAGAACGACCTCAAGTTGTTCCATGTGTCAGTTCTTCAGCTCTGAGTCCGGAACTAAAAGTTACATCAAGAGACATGGTCATTGACAACGTTACAAACACATGGGCACGTTTCTATGTTCCAAATCTCCACCATCACAATAAGATACCTTTGCTGGTGTATTTTCATGGTGGTGGCTTCTGCATTGGATCAGCAGCATGGAGTTGCTACCATGATTTCCTCGCTAAGCTATCTGCTGAAGTAGGGTGCATGATTATGTCAGTGAACTACCGATTGGCACCGGAGAATCCTCTTCCAGCACCATATGATGATGGAATAAAGACACTAATGTGGGTGAAACAACAATTTCTATACCAATACAATGATAGTGAATGGTGGACTAAGAAATGCAACTTTTCAAGTGTGTTCTTAGGAGGTGACAGTGCAGGTGCTAACATAGCTTACAACGTTGCCATAAGGGTATCTGAATCTGAATCTGCTTTGAGGCCTTTAAACTTGAAGGGACTTGTTCTGATACAACCTTTCTTCGGTGGAGAAGCGAGAACAGCATCTGAGAAATCCATGGCTGAATCACCTGGCTCTGCCCTTAACTTGGCAGCGTCCGATGCCTACTGGCGTCTGGCGCTGCCATGTGGGGCGGACCGTGATCATCCGTGGTGCAATCCTATTGCAAAAGGGTCAGTGAAGTTGAAGAATTTATTGGTGCCAACATTGGTGTGCATATCAGAGATGGATATATTGAAGGATAGGAACTTGGAGTTCTGTGATGCTTTGGCCAAAGAGGGTATCACAGTGGAATATTCTGTCTTCAAAGGTGTCGGCCATGCCTTTCAGATTCTCAGCAAATCTCACATCTCAAAATACACAACACATCAAATGATGTCTTGTCTCAAGTCCTTCATCATGTCTCTCTGA 1047 0.4355 MAALASSLSLSPQYRTRSKEYQQHHHGSVVEEIKGLIRVHKDGYIERPQVVPCVSSSALSPELKVTSRDMVIDNVTNTWARFYVPNLHHHNKIPLLVYFHGGGFCIGSAAWSCYHDFLAKLSAEVGCMIMSVNYRLAPENPLPAPYDDGIKTLMWVKQQFLYQYNDSEWWTKKCNFSSVFLGGDSAGANIAYNVAIRVSESESALRPLNLKGLVLIQPFFGGEARTASEKSMAESPGSALNLAASDAYWRLALPCGADRDHPWCNPIAKGSVKLKNLLVPTLVCISEMDILKDRNLEFCDALAKEGITVEYSVFKGVGHAFQILSKSHISKYTTHQMMSCLKSFIMSL* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4025 348 Gene3D alpha/beta hydrolase 35 347 IPR029058 -
Amo19g4025 348 PANTHER ARYLACETAMIDE DEACETYLASE 15 345 - -
Amo19g4025 348 Pfam alpha/beta hydrolase fold 96 322 IPR013094 GO:0016787
Amo19g4025 348 PANTHER CARBOXYLESTERASE 6-RELATED 15 345 - -
Amo19g4025 348 SUPERFAMILY alpha/beta-Hydrolases 54 346 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4025 Amo-Chr19 156355941 156357554 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4025 16 345 Carbohydrate Esterase AT5G16080 52.395 3.11e-119 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4025 - - gmx:100775824 516.538