Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4012 ATGGCGTCGTGTGTGTACGTGAGGTGGGAGGAAGTTTGGGTGTCGAGGGAGAAGGGAAGGAGGGAGGTGCATTACGTTCTGAGGAGAAGGGATGGGAGCTCAGATCTGGCACTTGTTGGCAAAGAGAAGAGCTTGAGGCACATGTTTTATCACTATGCGCTTCCCACCCAGAAGAAGCTTCTTGCTTCCATGGGGTCTTCTGTGTCTTTCTCCAAGCTCAAATCTCGCAAAGAAGTCGTTGATTGGTTGGATTCCCTATTCTCTGATTCCTCCGCAGAGAATTCAGCTCGTGCAGCTGATGCTGAAACCTTGAAGGATAATCAATTGGGGAAGCTGGGCCATGGTACAAAAGAATTCTTATGGTTAGGGTCTCCTTGGACTTGCAAGAAAAGAAGAAATCACTATCAGTCATTTAAGCGAAACGGTTTTAAGATATCTGTTTATGATTTTGTATATGTTTTAGCAGAAGAAGGCAAACGTCTGGTTGCCTACTTGGAAGACATGTATGAGGATTCCAGAGGCAACAGGATGGTTGTGGTACGATGGTTTCACAAAATTGATGAGGTTGGTATCGATTTGCCTCATGATTTTTGTGAGAGAGAGGTTTTCTTTTCTCTTTATCTTCAAGATCTAAGTATTGAATGCATAGATGGATTGGCTTCTGTCGTTACTCCACAACATTACGAAAAGCTTCAGAGTGTTGCGAGATATACTCTCTGGGAGCCATTCATATGCAGAAAACAATTTGATAATGATGATGTTAAACCCTTCGATGTATCCCAGCTTAAGGGTTACTGGAAACAAGATATAATCAGATTCATGTGTGCGCCTTCTGAATCAAGGTCTCATGGGAGTTCTGGTCTGTCTGACAATAGTCAAGGAAACTCTGATCCAGCTGCTGAGAGTAGACCTAAGAAGAGGCGGCGCCTGACAAAAGTTGGTAGCAAAGAAGTGGCTGATTTGGCTGCTATTAAACTAGATTTGAGTAATTCTAAATCCAATACCAAAATTGGAACGGGAAAGACTTCGTTGAAGAATGTTTCTGATGACTATTTAGTTGTAGGTTCCCAAGTTGAGGTTCTCTCACAGGACAGTGGAATGAGAGGCTGTTGGTTCAGAGCCTCTATTGTTAAGATGCACAAAAATAAAGTGAAGGTTCAATATCAAGACATTCAGGATGCCGTTGATGAAACCAAGAAGCTCGAGGAATGGGTTTTGGCTTCCAAAATCTCAGCTCATGATGATCTGAGGCTACGGAAGTATGGAAGGAATAAGATTCGGCCAGTCCCACCACCTCATAGATTTGAAAAATCCACGGGGGTTGATGTTGGTTCCATTGTTGATGTTTGGTGGCATGACGGTTGGTGGGAAGGCATTGTTGTTAAAATAGTGTCTGAAGCTAAATATCGTGTTTATTTCCCAGGGGAGAAGTTGGTGTCAATGTTTGACCTTGATAACCTACGACAGTCTCAAGAATGGATAGGGAATGAGTGGGTGAAGATGAGGGGAAGGCCTGACCTTGTGGATTCTGTATTGTCAACCTTAAAGGCAAAACAAGGTCCCTGCAATTCAAGTGAATTATCCACAGAAGATGTCATACAATCAAAGGAGGCTGATGCATGCTTGGATTCTGAAGGGGATAAAAGTAAGAAGCCTGTGTTGTTTCCAGACCTCTTGAAAGATGATATACTATCTCAATTACGGTGGTCATCTAGGAAGAGGAGACGTAGTAATGGCACCTCTTTGGGAAGCGATAAAGATAGGAGAAAGTCCCCAAACTCTCTGGAATCTGATGCTTCTGACAGTTTTGTGATTCCAGCATTTGTGAATGCTGAACATGACGACTTCACATATGGAGGGGATCCTTCTGTTTTCAACTCTTCGGTTGTCCCTTCCTTAACCAACTTAGTTATGTGTAGGTAA 1923 0.4301 MASCVYVRWEEVWVSREKGRREVHYVLRRRDGSSDLALVGKEKSLRHMFYHYALPTQKKLLASMGSSVSFSKLKSRKEVVDWLDSLFSDSSAENSARAADAETLKDNQLGKLGHGTKEFLWLGSPWTCKKRRNHYQSFKRNGFKISVYDFVYVLAEEGKRLVAYLEDMYEDSRGNRMVVVRWFHKIDEVGIDLPHDFCEREVFFSLYLQDLSIECIDGLASVVTPQHYEKLQSVARYTLWEPFICRKQFDNDDVKPFDVSQLKGYWKQDIIRFMCAPSESRSHGSSGLSDNSQGNSDPAAESRPKKRRRLTKVGSKEVADLAAIKLDLSNSKSNTKIGTGKTSLKNVSDDYLVVGSQVEVLSQDSGMRGCWFRASIVKMHKNKVKVQYQDIQDAVDETKKLEEWVLASKISAHDDLRLRKYGRNKIRPVPPPHRFEKSTGVDVGSIVDVWWHDGWWEGIVVKIVSEAKYRVYFPGEKLVSMFDLDNLRQSQEWIGNEWVKMRGRPDLVDSVLSTLKAKQGPCNSSELSTEDVIQSKEADACLDSEGDKSKKPVLFPDLLKDDILSQLRWSSRKRRRSNGTSLGSDKDRRKSPNSLESDASDSFVIPAFVNAEHDDFTYGGDPSVFNSSVVPSLTNLVMCR* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4012 640 MobiDBLite consensus disorder prediction 281 314 - -
Amo19g4012 640 Pfam BAH domain 145 252 IPR001025 GO:0003682
Amo19g4012 640 SMART agenet_At_2 350 418 IPR014002 -
Amo19g4012 640 SMART agenet_At_2 439 495 IPR014002 -
Amo19g4012 640 MobiDBLite consensus disorder prediction 571 598 - -
Amo19g4012 640 Gene3D - 114 259 IPR043151 -
Amo19g4012 640 SMART BAH_4 143 260 IPR001025 GO:0003682
Amo19g4012 640 ProSiteProfiles BAH domain profile. 143 260 IPR001025 GO:0003682
Amo19g4012 640 PANTHER AGENET AND BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 4 639 - -
Amo19g4012 640 MobiDBLite consensus disorder prediction 281 299 - -
Amo19g4012 640 MobiDBLite consensus disorder prediction 578 595 - -
Amo19g4012 640 Pfam Agenet domain 355 431 IPR008395 -
Amo19g4012 640 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 4 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4012 Amo-Chr19 156136193 156139853 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4012 362 493 PHD Transcription Factor Family AT5G58610 30.657 2.69e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4012 - - gmx:100817358 758.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4012 19 156136193 156139853 Amo19g4012 19 156136193 156139853 ECH