Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4000 ATGGCCACACTTCAAGGATGGGCAGACGTGAGGAGCTTCAGCCTCCAAGTCATCACCGGCCGCTGGTTCCTCGTGTTCGCTTCCTTCTTAATCATGGCAGCCGCCGGAGCCACCTACATGTTCGGCCTCTACTCCAGCGAAATCAAAAGCACCCTCGGCTACGACCAAACCACCCTCAATCTCCTCAGCTTCTTCAAGGACTTTGGCAGCAACGTCGGCGTCCTCTCCGGCCTCATCAACGAGCTAACCCCACCCTGGGTGGTTRTAGCCATCGGCGCAATCCTCAACCTCTTCGGCTACCTCATGATCTGGCTCTCCGTCACCAAAAGAATCGCCAGACCAGCGGTCTGGCAAATGTGRTTATACATTTGCATCGGCGCRAACTCTCAGTCYTTCGCCAACACCGGCTCTCTTGTCACGTGCGTCAAGAACTTTCCAGAAAGCCGCGGCGTCGTTTTGGGWATCTTGAAAGGCTACGTTGGACTCAGCGGAGCCATCATAACTCAGTTATACTCTGCCATTTACTATGATGATACCAAGGCTTTGATTCTCTTCATTGGTTGGCTTCCCGCCGCAATCTCCCTCGTCTTCCTCCGAACCATTCGCTATATGAAGCCGGTTCGTCAGCCTAACGAGCTCAAAGTCTTCTTTAACTTTCTTTACATCTCTCTTGCACTCGCTGGCTTTCTTCTCGTCATGATCATTATCCAGAAGAGGGTTGACTTCACTCAGAGCGAGTTTGGTGTAACCGCTGCTATTGTTATTGTCTTGCTCTTCCTCCCTGTCGCCATTGTTGTCTTGGAGGAGATCAAGATCTGGGAGGCCAAGAAGCTTGCCTTGGTGGACCCTTCTCCGGTGAAGATCATCACCGAGGGTCAAAAAGTCAACGCAGAAGTCAAGAAAGAATCGGAAGTAGTAGCAGTAGAAGAAACAAGATGGTGGCAGAATGTTTTTAATCCACCGGAACGAGGTGAGGATTACACCATCCTGCAAGCACTCTTCAGCATTGACATGCTAATCCTGTTCATTGCCTGCATTTCTGGGATTGGGGGAACGTTGACCGCAATTGACAACCTTGGTCAAATAGGAACCGCTCTGAAATACCCAAAGAAAAGCATAAGCACTTTTGTGTCACTAGTGAGTATCTGGAACTACCTAGGACGTGTTTTCTCCGGGTTTGTTTCAGAGCATTTCTTGCAGAAATACAAATTCCCAAGACCTCTAATGTTGACCTTGACTCTGTTACTGTCTTGTGTTGGTCACCTTCTCATAGCTTTCGATGTACCGGATGGTCTTTACATAGCTTCCGTGATCATTGGTTTCAGCTTTGGTGCGCAATGGCCTTTACTTTTTGCCATAATCTCCGAGCTATTTGGTCTCAAATACTATGCAACTCTGTACAACTTTGGAAGTGTGGCGAGTCCACTTGGATTGTATGTTCTTAACGTCAGGATCACTGGTCATTTGTATGACAAAGAAGCCAGGAAACAATTGGCGGCGTTGGGGCTAAAGAGAAAAGCAGGGGACCAATTGACTTGTGTTGGTGTCAAGTGTTTTAGATTGTCCTTCATTATTATCACCGCTGCTACTTTCTTTGGTGCCATTGTTTCGCTCTTTTTGGTGGCCCGGACTAGGGAGTTTTACAAAGGGGATATTTACAAGAGATACCGGGAACCGGCCGCCGCCGAGACCCAATTGGTCGTCGTGGAGGAGAACGGTGGTGCCAAGACAGGGCATCAAGATGGTCATCATCATCAATCTAATTAG 1767 0.4844 MATLQGWADVRSFSLQVITGRWFLVFASFLIMAAAGATYMFGLYSSEIKSTLGYDQTTLNLLSFFKDFGSNVGVLSGLINELTPPWVVXAIGAILNLFGYLMIWLSVTKRIARPAVWQMXLYICIGANSQSFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLYSAIYYDDTKALILFIGWLPAAISLVFLRTIRYMKPVRQPNELKVFFNFLYISLALAGFLLVMIIIQKRVDFTQSEFGVTAAIVIVLLFLPVAIVVLEEIKIWEAKKLALVDPSPVKIITEGQKVNAEVKKESEVVAVEETRWWQNVFNPPERGEDYTILQALFSIDMLILFIACISGIGGTLTAIDNLGQIGTALKYPKKSISTFVSLVSIWNYLGRVFSGFVSEHFLQKYKFPRPLMLTLTLLLSCVGHLLIAFDVPDGLYIASVIIGFSFGAQWPLLFAIISELFGLKYYATLYNFGSVASPLGLYVLNVRITGHLYDKEARKQLAALGLKRKAGDQLTCVGVKCFRLSFIIITAATFFGAIVSLFLVARTREFYKGDIYKRYREPAAAETQLVVVEENGGAKTGHQDGHHHQSN* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4000 588 CDD MFS_Mch1p_like 20 534 - -
Amo19g4000 588 PANTHER MFS TRANSPORTER 4 578 - -
Amo19g4000 588 Gene3D MFS general substrate transporter like domains 316 549 IPR036259 -
Amo19g4000 588 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 4 578 - -
Amo19g4000 588 SUPERFAMILY MFS general substrate transporter 20 546 IPR036259 -
Amo19g4000 588 Pfam Nodulin-like 21 266 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4000 Amo-Chr19 155936397 155938623 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4000 8 558 Nodulin-like Gene Family AT2G39210 70.072 0.0 811
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4000 - - pvu:PHAVU_007G024800g 920.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4000 19 155936397 155938623 Amo19g4000 19 155936397 155938623 ECH