Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3998 ATGGCGGTTGCAGCAGGAGGAGGAAAAGGATTCACGGCGGCGGACATGAAAGGCCTAACCGTGCAAGTGATAACAGGGCGGTGGTTCGTGGTGTTCGCGTCCTTCCTAATCATGTCAGCTTCAGGAGCAACTTACATGTTCGGCCTCTACTCCAACGACATCAAAACGGCCCTCGGCTATGACCAAACTACCCTCAATCTCCTAAGCTTCTTCAAGGACTTAGGCGCCAACTTAGGCGTTCTCTCCGGCCTAATRAACGAGATCACCCCTCCCTGGGTGGTCCTCGCCATGGGCTCCGTCATGAACTTCTTCGGCTACTTCATGATATGGCTCTGCGTCACATCAAAGCTTCCCAAACCCAAGCACTGGCAAATGTTCCTCTACATCTTCATCGGCGCTAACTCTCAGTCCTTCGCCAACACCGGCTCTCTCGTTACCTGCGTCAAGAACTTCCCTCGAAGCCGCGGCGTTGTCCTCGGAATCTTGAAAGGCTACGTCGGATTAAGCGGTGCCATCATCACGCAGTTGTACTACGCTTTCTACTACGACGACTCCAAGGCTTTGATTCTTCTCATTGGCTGGCTTCCCGCTGCTATTTCCTTCCTCTTCCTCCGAACCGTTCGCTACATGAACCCCGTTCGTCAGCGCAACGAGCTCGCCGTCTTCTACAAGTTCCTCTACATCTCCCTCGGCCTCGCCGGATTCCTTATGGTTATGATCATAGTTCAGAAGAACGCCACTTTCAATCAGACCGAGTACGGTGCCAGCGCCGCCATCGTTCTCTTCCTTCTCCTCCTCCCTCTCGCTGTTCTCTTTGGCGAAGAGTATAAGATCCGTCAGATCCAGCAGCATTCCTCCGGTGACCCCTTACCGGAGGTAAAAGTAGTAGCTGCTGACGAAGAAAGAAAGAATAAAGATAGAGCACTCGTCACCGGAGTGGAAAAAGAAACTAAATGGTGGGAAAATGTTTTGACTCCACCGGAGAGAGGAGAAGACTACACCATTCTCCAAGCACTCTTCAGCATAGACATGTTGATATTGTTCTTCGCCGGAACATGTGGGTGTGGTGGAACGTTAACCGCAATCGACAACTTGGGTCAAATTGGAACCTCCCTTGGGTACCCAAAGAAAAGCATAAGCACATTTGTGTCACTAGTGAGTATATGGAACTATCTCGGTCGAGTTTTCTCCGGGTTTGTTTCTGAACACGTGCTAATAAAATACAAATTCCCAAGACCACTCATGTTCACCATGATTCTTCTCTTGTCTTGTGTTGGACACTTGCTAATAGCATTCAATGTCCCTAATGGTCTCTATGTGGCTTCAGTCATAATTGGATTCTGTTTTGGAGCACAGTGGCCTTTGATTTTTGCCATTGTTTCGGAGCTGTTTGGTTTAAAGTACTATTCAACTTTGTATAACTTCGGAGGCATGGCGAGTCCTATTGGATTGTATGTGCTTAATGTGAGAGTCACCGGGCATTTGTATGACATAGAAGCGAAGAGGCAGTTGGCGGAATCTGGTATCAAAAGAAAGATTGGTCAGGAATTGAATTGTCTTGGGACCAGTTGTTACAAGATGTCCTTTGTTATAATTGCTGTAGCTACTTTTACTGGAGCTATTGTATCGCTTCTTTTGGTGGCAAGGACATATAGCTTCTATAAAGGTGACATTTATAAGAGGTACAAGGTGGAGGAGGAAGAAGAGGAGACTCAGGTACCCGGCACCGCCGCTGCCGCCGAGATGACTGTGGTTCAGAACGGCCGTGAAAATGGACAGGGAACTAAAGTAGGGGCATGA 1800 0.485 MAVAAGGGKGFTAADMKGLTVQVITGRWFVVFASFLIMSASGATYMFGLYSNDIKTALGYDQTTLNLLSFFKDLGANLGVLSGLXNEITPPWVVLAMGSVMNFFGYFMIWLCVTSKLPKPKHWQMFLYIFIGANSQSFANTGSLVTCVKNFPRSRGVVLGILKGYVGLSGAIITQLYYAFYYDDSKALILLIGWLPAAISFLFLRTVRYMNPVRQRNELAVFYKFLYISLGLAGFLMVMIIVQKNATFNQTEYGASAAIVLFLLLLPLAVLFGEEYKIRQIQQHSSGDPLPEVKVVAADEERKNKDRALVTGVEKETKWWENVLTPPERGEDYTILQALFSIDMLILFFAGTCGCGGTLTAIDNLGQIGTSLGYPKKSISTFVSLVSIWNYLGRVFSGFVSEHVLIKYKFPRPLMFTMILLLSCVGHLLIAFNVPNGLYVASVIIGFCFGAQWPLIFAIVSELFGLKYYSTLYNFGGMASPIGLYVLNVRVTGHLYDIEAKRQLAESGIKRKIGQELNCLGTSCYKMSFVIIAVATFTGAIVSLLLVARTYSFYKGDIYKRYKVEEEEEETQVPGTAAAAEMTVVQNGRENGQGTKVGA* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3998 599 Pfam Major Facilitator Superfamily 364 551 IPR011701 GO:0022857|GO:0055085
Amo19g3998 599 Gene3D MFS general substrate transporter like domains 340 553 IPR036259 -
Amo19g3998 599 CDD MFS_Mch1p_like 26 540 - -
Amo19g3998 599 PANTHER MFS TRANSPORTER 11 572 - -
Amo19g3998 599 Pfam Nodulin-like 27 271 IPR010658 -
Amo19g3998 599 SUPERFAMILY MFS general substrate transporter 27 552 IPR036259 -
Amo19g3998 599 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 11 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3998 Amo-Chr19 155917024 155919340 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3998 1 563 Nodulin-like Gene Family AT2G39210 67.483 0.0 775
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3998 - - gmx:100808975 853.203