Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3978 ATGGCGGTGGGAATATCAGTTCTGATAGCACTGAAAGCGACGGCGCTATTACTGTGCTTCGTGTACCTGAAGAACCATGGCTACACCCTCATCTCCGCCCCATTCCTCTACGCATCACTCGTTTCGTTCTTGGTCTCGATCGCATCTCACCCCTCCATTGACCTTCCCATGCTTTTAGGAAAGGACACCGATGGAACCTTCCCAATCTGGTCCCTCATGATGTTCAGCCCTTACTTGTACTTCGTCAGAGTCTTCTCCGCGCTTCGAAGGCTCCGAAGCGGTGAACCACCGTACACTGAAGTCCACCCTGGACTCTTCGTCGGAGGGTGGCCATCGTCGCGCCAGAAGCTGCCACCTGGCGACCCTGCCATCGTTGATTGCACCTGCGAGTTCCCGAGGTTGGAGGAGTTCTCTGGGCTTCCTTATCTGTGCATTCCCACATGGGATACAAGGTCACCCAAGCCCTCTGATATTGAATCTGCTGTTAAGTGGGCTTCTAAGAAGAGAGACCTCAATAAACCTATTTTTATTCACTGTGCTTATGGTCATGGAAGAAGTGTTGCTGTTATGTGTGCATTGCTAGTGGCACTGGGTATTGCAGAGGATTGGAAGAATGCTGAGAAGCTGATCAAACAAAAACGGCCTTACATCCGGATGAATGCCCTCCATCGCAAGGCTCTTGAAGAATGGTCCAAGCACAGGTTGTCCGCTCCAAAGAGGCAATGA 726 0.5138 MAVGISVLIALKATALLLCFVYLKNHGYTLISAPFLYASLVSFLVSIASHPSIDLPMLLGKDTDGTFPIWSLMMFSPYLYFVRVFSALRRLRSGEPPYTEVHPGLFVGGWPSSRQKLPPGDPAIVDCTCEFPRLEEFSGLPYLCIPTWDTRSPKPSDIESAVKWASKKRDLNKPIFIHCAYGHGRSVAVMCALLVALGIAEDWKNAEKLIKQKRPYIRMNALHRKALEEWSKHRLSAPKRQ* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3978 241 CDD DSP_bac 94 232 - -
Amo19g3978 241 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 156 225 IPR000387 GO:0016311|GO:0016791
Amo19g3978 241 PANTHER - 3 239 - -
Amo19g3978 241 Gene3D Protein tyrosine phosphatase superfamily 98 236 IPR029021 -
Amo19g3978 241 SMART dsp_5 97 233 IPR020422 GO:0006470|GO:0008138
Amo19g3978 241 Pfam Dual specificity phosphatase, catalytic domain 124 232 IPR000340 GO:0008138|GO:0016311
Amo19g3978 241 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 82 235 IPR029021 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3978 133 238 Protein tyrosine phosphatase (PTP) family AT5G56610 30.000 1.09e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3978 - - aprc:113873203 426.017