Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3962 ATGGATGTGATTGACTTGGAGGATGAATCGAGTGATATTGAGATTTTGAATTCTATGGTTGTCACCAATGAGCACTTCCAAACTGCTTTGACTTCTTCAAACCCATCTGTGTTGCGTGCAACAACGGTTCAATACCCAGTGGAACATGCTGAGAAGTTTGAGAAATTCGGCATGTCACCTTCCAAAGGTGTTCTTTTCGTTGGCCCTCCGGGCTGCGGCAAAACTCTGTTTGCAAAAGCAATTGCAAATGAATTCCAGGCCAACTTCATAAGTGTCAGGGACCTGCATTGCTTCTGCAGTTGGCCTAGCATTCCAAAATTCACACGGTCCAAAATTCATAAATGGACCGAGTCATTTGTTGTCCTGGAAAAAAAGAAGTCTCAGCTAAAAAGGGTTGAAAGATTTTAG 408 0.4289 MDVIDLEDESSDIEILNSMVVTNEHFQTALTSSNPSVLRATTVQYPVEHAEKFEKFGMSPSKGVLFVGPPGCGKTLFAKAIANEFQANFISVRDLHCFCSWPSIPKFTRSKIHKWTESFVVLEKKKSQLKRVERF* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3962 135 PANTHER CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D 1 101 - -
Amo19g3962 135 Pfam ATPase family associated with various cellular activities (AAA) 64 96 IPR003959 GO:0005524|GO:0016887
Amo19g3962 135 Gene3D - 41 94 IPR027417 -
Amo19g3962 135 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 93 IPR027417 -
Amo19g3962 135 PANTHER AAA-FAMILY ATPASE 1 101 - -
Amo19g3962 135 CDD AAA 60 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3962 Amo-Chr19 155510950 155512020 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3962 56 92 Calmodulin-binding Proteins AT3G56690 51.351 3.24e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3962 K13525 - ahf:114925624 185.652