Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3960 ATGGAGCTTTCTGCATTCCCGACGTTCAGAGCAGTTACCAATCCTTCGATTTTCCCTTTCTCTTCGAAACAAGTTTGTTGCCGGTGCCCTTTTCTTCTTCGTCGCCGCGACTATGGCCTTCGCTGGAATCGAAATTCGAAACCGTTTGTTCGCATCAGGTTGTGCTTGGAGAATGCTTCGTCGTCGAACGGTTATGGCGGAACCGAGAGCGGAGAAGCTAAACCTGAGTTCATCGAAGTCATCGGCATTGGCAGTCGGAAGGACGCGGTTATCGATTTCTGCTTGAGATCGCAGTTTCAGTTGTCGTCGCTGCGGTTTTGGAATATCATAATGAAAGAATCACACGAGGCTCAATTACAGCGTAGATCAAGGGAAGAAGAATTTTCTCCAACAGTTGTCAAAGCTCCAGTATTTATGAAGACATGCTCAAAGACTGTTGTCCTTGTGGCTAGTGCAGGATATGGATTGGACCTTACTGTTGCAGTTGATATTTTTGAAACTGTGAGGTCCAGAAATGGGTTAGCAGTTGCTATAGTTTTGAGGCCTTTTAGCTTTGAAGGGTTAAGACGACAGGATGAGGTGAAGGATTTGATGGGGAAGCTTAAGGAGAGCGCGAATTTAATTATAGAAATTGATATTGATGCACTGCTTCAAAAAGACTTGTTGACTCTAGATGAGGCCATGAAGACTGCAAATAATGCAGTTTTGTTGGCTATTAAGGCCATATATGTATTAAAATCTGAGACGCATAGAAAACTTGTAGATAGATTGCAGGATGGTGTGACTGAAGCCAGCACTTCAGAAGTTAATAAAATATTGGCAAACTATAAAGAAGCAGGGATCGGATTTGGAGCTGCATATAACATCAAAACCTCAATATTGCAGTCTACATTAGAGTGTCCTTTCCTTGGTGTTCGTTTAAAGGATCCAACTAGTATTGTTATCTGCATTCTTGCTAGTTCAGTGCCCATTAATCATAGCGATATAGCAGCCTTTCTGCGTACATTCCGTCAAACTACAGCATATACGGGGGACATATTAGTATCCACAATCTATGAGCCAAATGTTGAGCCCAACTTATGGATAACAACTGTCCTTGCACTTGGCAGTTCAAACGTGAAACAATCTGTCCAGAGTGTTGGTATACTATCCAGACTGGCCCTGCATTTTCCTCGTCTTTTTAGCTTTTGGGGGACGCATAATCAGCAACAAGTTCACACAGGAAAAGAGTGTGCAGTAACTCCTCAGAAAGTGATGGAGTCTTATGAAAGGGATGAGGAGCCAAATAAGAATGCTGCACATTTTGTAGATGGCAGTTTTAATAATCACAATGAACAGTTGGAGCCAAGAGTGAGCAGCAGCAGCTCCAAGTTGGCTACTTCAAGGTTTTCTGAAAAAGAAGATATGTTCGACTCTATAGCCCAGAATTCTGTCCCTTATGACTCTATTATTGAAGATGACTATGCTTTTCAAAGGGAGCAACTTGAAAACTGGAATCTGGGTCCTGGATATGAAGTGGCAAGGGAGTGGGCCCAAGAACGGGTAGCTGATGCAACACATATGATAGATAATCTAAGCATATTCCACCTTCCTGTAGGTGTGAGGCCTTCAGAAGATTTGAAAGATTGTTTAAAAGTCTCATTCATGACAGAACAGAAGGAACCGGAATCTGTCAATGAAGTAAATGTATCAACAATAAATGAGGGCATCCCTTCTTGGAATGTAGTGACTGATGCAAGTTTGGAAGCAGTAAAGGGATTGGCATCTTCACTTTTGAAGGGAAAAGATGCTAATAAACCAAAGAAGCATGGAGTACTTTCTGATCGAGCTGCTTCTATGCTGGAGGCAGAACGGGACTTGTCAAAAAAGTGGAATCCTGTTGTGGAAATGCAATACAGGGGAGGAAGATACAAGGGACGATGCCAAGGAGGTCTTCCTGAAGGAAAGGGGCGTCTTATTCTTGGAGATGGAAGTATATATGATGGTTCATGGCGCCATGGTAAGAGATCAGGGCCAGGTACCTTCTATTTCAAAAACGGAGACATGTTTCAAGGAACATGGAGGGATGATGTCATGCACGGCAAGGGTTGGTTTTATTTTCACACTGGTGATCGGTGGTTTGCAAACTTTTGGAAGGGAAAGGCCAATGGTGAGGGGAGGTTCTACAGCAAGTCTGGTGATGCCTTCTTTGGGAATTTCAAAGATGGCTGGCGTCATGGCCAGTTTCTTTGCATCAATGCTAACGGAACTAGGTATGCTGAGATTTGGGAACAAGGTGTTCTTTTAGACATCAAACAGTTATACAGATGA 2310 0.4299 MELSAFPTFRAVTNPSIFPFSSKQVCCRCPFLLRRRDYGLRWNRNSKPFVRIRLCLENASSSNGYGGTESGEAKPEFIEVIGIGSRKDAVIDFCLRSQFQLSSLRFWNIIMKESHEAQLQRRSREEEFSPTVVKAPVFMKTCSKTVVLVASAGYGLDLTVAVDIFETVRSRNGLAVAIVLRPFSFEGLRRQDEVKDLMGKLKESANLIIEIDIDALLQKDLLTLDEAMKTANNAVLLAIKAIYVLKSETHRKLVDRLQDGVTEASTSEVNKILANYKEAGIGFGAAYNIKTSILQSTLECPFLGVRLKDPTSIVICILASSVPINHSDIAAFLRTFRQTTAYTGDILVSTIYEPNVEPNLWITTVLALGSSNVKQSVQSVGILSRLALHFPRLFSFWGTHNQQQVHTGKECAVTPQKVMESYERDEEPNKNAAHFVDGSFNNHNEQLEPRVSSSSSKLATSRFSEKEDMFDSIAQNSVPYDSIIEDDYAFQREQLENWNLGPGYEVAREWAQERVADATHMIDNLSIFHLPVGVRPSEDLKDCLKVSFMTEQKEPESVNEVNVSTINEGIPSWNVVTDASLEAVKGLASSLLKGKDANKPKKHGVLSDRAASMLEAERDLSKKWNPVVEMQYRGGRYKGRCQGGLPEGKGRLILGDGSIYDGSWRHGKRSGPGTFYFKNGDMFQGTWRDDVMHGKGWFYFHTGDRWFANFWKGKANGEGRFYSKSGDAFFGNFKDGWRHGQFLCINANGTRYAEIWEQGVLLDIKQLYR* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3960 769 Gene3D - 711 768 - -
Amo19g3960 769 Gene3D - 659 710 - -
Amo19g3960 769 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 1 767 - -
Amo19g3960 769 Pfam MORN repeat 710 727 IPR003409 -
Amo19g3960 769 Pfam MORN repeat 642 658 IPR003409 -
Amo19g3960 769 Pfam MORN repeat 660 682 IPR003409 -
Amo19g3960 769 Pfam MORN repeat 683 705 IPR003409 -
Amo19g3960 769 Pfam MORN repeat 730 741 IPR003409 -
Amo19g3960 769 SUPERFAMILY Tubulin nucleotide-binding domain-like 78 244 IPR036525 -
Amo19g3960 769 PRINTS Cell division protein FtsZ signature 173 194 IPR003008 GO:0005525
Amo19g3960 769 PRINTS Cell division protein FtsZ signature 267 288 IPR003008 GO:0005525
Amo19g3960 769 Gene3D Tubulin/FtsZ, GTPase domain 111 369 IPR036525 -
Amo19g3960 769 PANTHER PROTEIN ACCUMULATION AND REPLICATION OFS PROTEIN 1 767 - -
Amo19g3960 769 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 634 760 - -
Amo19g3960 769 SMART morn 727 748 IPR003409 -
Amo19g3960 769 SMART morn 635 656 IPR003409 -
Amo19g3960 769 SMART morn 658 679 IPR003409 -
Amo19g3960 769 SMART morn 681 702 IPR003409 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3960 1 767 PP2C-type Phosphatase Gene Family AT1G75010 45.489 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3960 - - aip:107618192 1177.54