Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3949 ATGGAATATGCTGCTGGTGGAGAGCTATTTGAGCGAATATGCAATGCAGGACGGTTCAATGAGGATGAGGCGCGCTTCTTCTTCCAACAACTTATCTCAGGAGTTAGCTATTGTCATGCAATGCAAGTATGCCATCGTGACTTGAAGTTAGAGAACACATTACTAGATGGCAGTCCAGCTCCTCGGTTAAAGATATGTGATTTTAGGTATTCTAAGTCCTCAGTGCTACATTCACAACCAAAATCTACAGTTGGTACCCCTGCATACATTGCTCCGGAAGTTCTACTCAGGAAGGAATATGATGGCAAGGTATTTTGCTGCTATGAGGCCAAATAA 336 0.4315 MEYAAGGELFERICNAGRFNEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFRYSKSSVLHSQPKSTVGTPAYIAPEVLLRKEYDGKVFCCYEAK* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3949 111 Pfam Protein kinase domain 1 103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g3949 111 ProSiteProfiles Protein kinase domain profile. 1 111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g3949 111 Gene3D Transferase(Phosphotransferase) domain 1 1 105 - -
Amo19g3949 111 SUPERFAMILY Protein kinase-like (PK-like) 1 103 IPR011009 -
Amo19g3949 111 PANTHER SERINE/THREONINE KINASE 1 105 - -
Amo19g3949 111 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
Amo19g3949 111 SMART serkin_6 1 111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g3949 111 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2E 1 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3949 Amo-Chr19 155263344 155264589 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3949 1 102 CBL-interacting serine-threonine protein kinases AT1G30270 50.459 1.27e-28 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Amo19g3949 Pkinase 2.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3949 K14498 - ahf:112779146 233.802