Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3911 ATGCTCCAGAAAAGCCCCAGGATGGTAAGTGGACGCTTCTCGAGACCTCTCTCTAAGAAGTCAGAAGATGGGAATAGTGGGATAACTATTGATCACCTGCATAAGCTGAATCCGAACAATGTCTCGGCTTGGAATATGAAAAGGCTGATCAATATGGTTCGGCATGGAGCTCTAACTACATTGGATGAACAGATACTTAACTCGACCAATGATGATGAGAATGCCACAGAGATTAGAAGTGAAAATCAGGCAAAAGGAGCAGCCAAGAAAATTTTTCAGAATGTTGCTTGTGGTAGCAGGTTCATATACAAGAAGGACTTACAGCGATTTATGCAAGAAGATGAAGTTGTGAAAACCTTGAGTCTCTTTGAAGGTGCATCCGAGACCGGAAGAATAAGCAAAGCATCCTTGAAGAACTGGGTGGTCAATGCCTTTAGAGAGAGGAGAGCACTCGCCTTGACATTGAATGATACGAAAACGGCGGTGAACAAGCTTCATCGAATGCTTAATTTCTTAGTTGCAATTATTATCCTAGTTATCTTTCTCTTGATAATGGGAATTGCCACCTCCAAATTTCTCCTCTTCGTGAGCTCACAGCTTGTCTTGGTTGCATTCATATTTGGAAATACCTGCAAGACCATATTTGAAGCCATTATTTTCTTATTTGTAATGCACCCGTTTGACGTTGGAGACAGATGCGAAATTGAAGGGGTCCAGATGGTTGTGGAAGAAATGAACATATTGAACACCATATTTCTGAGATATGATAATTTAAAGGTAATGATCCCTAACAGTGTCCTTGCTACAAAGGCCATAAACAACTTCTACCGCAGTCCTGACATGGGAGATTCTGTTGAATTCCTTATTCATGTGTCTACACCAATGGAAAAGTTTACTCAAATGAAACACAGAATACAGAGTTACATTGATAACAAGAAGGAGCACTGGTATCCATCACCATTTATAGTCTTCAAGGATTGTGAACTCTTAAACATGGTTCGCATTGCGGTTTGGCCAACGCACAGGATGAACTTCCAAGACATGGGAGAGAGATTCATAAGGAGGTCGTTGTTGATCGACGAGATGATCAAGATTTTCCGGGAGCTTGACATACAGTACCGACTGCAGCCGCTGGATATTAGTATTAGAAGCATGCCTACCACTTCTGAGCGTCTTCCACCAAGTTGGTCAACAATCACAAGTTGA 1206 0.4163 MLQKSPRMVSGRFSRPLSKKSEDGNSGITIDHLHKLNPNNVSAWNMKRLINMVRHGALTTLDEQILNSTNDDENATEIRSENQAKGAAKKIFQNVACGSRFIYKKDLQRFMQEDEVVKTLSLFEGASETGRISKASLKNWVVNAFRERRALALTLNDTKTAVNKLHRMLNFLVAIIILVIFLLIMGIATSKFLLFVSSQLVLVAFIFGNTCKTIFEAIIFLFVMHPFDVGDRCEIEGVQMVVEEMNILNTIFLRYDNLKVMIPNSVLATKAINNFYRSPDMGDSVEFLIHVSTPMEKFTQMKHRIQSYIDNKKEHWYPSPFIVFKDCELLNMVRIAVWPTHRMNFQDMGERFIRRSLLIDEMIKIFRELDIQYRLQPLDISIRSMPTTSERLPPSWSTITS* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3911 401 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 6 398 - -
Amo19g3911 401 SUPERFAMILY Sm-like ribonucleoproteins 216 275 IPR010920 -
Amo19g3911 401 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 6 398 IPR016688 -
Amo19g3911 401 Gene3D - 226 275 IPR023408 -
Amo19g3911 401 MobiDBLite consensus disorder prediction 1 31 - -
Amo19g3911 401 Pfam Mechanosensitive ion channel 168 372 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3911 Amo-Chr19 154850424 154852642 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3911 2 397 Mechanosensitive Ion Channel Family AT1G53470 63.366 9.93e-178 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3911 K22048 - gmx:102665658 641.728