Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3910 ATGGACATGGAGATGGAGGAGCTTCAGCGCAACTACGACGCCGGTGCAAGTACCGCCGCTGCCGCAGGAGGGAAGCTTTCGCCGGTGGAGGAGTCGCCGACGACGAGCATGAACAACCGCGTATCCAAGGAGCTCAAGGTTTCGTTCGAGGAACCCGCGCCACCGAATTTGATGGCTGATATGCCTAATAGCTCCGATGCCATCAGAAGAAGACACAGCAGGGACTTGCCGTCGACTGGAGATTTCCATCGGCCGCCGCATCCGCCGCACCACAGCAGGGAATTGCCGTCTCGGAGCGGCCAAAGTGGTGATGGCGAGGTTGTGAGGTGCACCTCTAACGGTTCCATAGAGAGAACTCTTTCCATGCAGAGCAGAAAATCAACATTGTTGAAGGCTAAAACCCGGTCCAGGTTGCTGGACCCACCAGAAGAACCCGAAAGAAAATCGGGTCGGATTGCCAAGTCGGGTCAGTTGTTCTCAGGGTTGCTTGGCAAGAAGAGTGGTGGTGATGACGATGATGAAGATGATCCATTTTTGGAAGAGGATCTTCCTGATAAGTATAAAAAATCTCAGTTTAGTATATGGGTTTTACTTCAATGGGTGGGGTTGATTTTGATCATTGCTGCATTGATTACAACTCTGAGTGTTCCTTTCTTGAGGGAGAAGAATCTTTGGCAGCTGAAGCTGTGGAAATGGGAGGTTATGATTCTTGTGTTGATATGTGGAAGGTTGGTATCTGGTTGGCTTATCAGAATAGCTGTGTTCTGCATTGAGAGAAACTTCCTTTTGAGGAAGAGAGTTCTGTATTTTGTGTATGGTGTGAAGCATGCTGTTCAGAATTGTGTTTGGTTAGGGCTTGTTTTGATAGCTTGGCACTTCTTGTTTGATCAGAAAGTTCAGAGAGAGGTTCATAGTAATTTTCTTGAGTATATTACCAAGTTTTTGGTGTGCTTGTTGGTTGGTACTCTGGTTTGGTTGGTGAAAACCCTTATGGTTAAGGTTCTGGCCTCTAGTTTCCATGTTAGCACATATTTTGATAGGATTCAAGAGTCACTGTTTAATCAGTTTGTTATTGAGACACTCTCCGGGCCGCCTTTGGTCGAGCTTCAGCGATATGAGGATGAGGACAAAGGATTCTTGAAGATGTCGAGAAGCTACAGAAAGCCGGAGTTACCATACCTCCTGACCTGA 1191 0.4736 MDMEMEELQRNYDAGASTAAAAGGKLSPVEESPTTSMNNRVSKELKVSFEEPAPPNLMADMPNSSDAIRRRHSRDLPSTGDFHRPPHPPHHSRELPSRSGQSGDGEVVRCTSNGSIERTLSMQSRKSTLLKAKTRSRLLDPPEEPERKSGRIAKSGQLFSGLLGKKSGGDDDDEDDPFLEEDLPDKYKKSQFSIWVLLQWVGLILIIAALITTLSVPFLREKNLWQLKLWKWEVMILVLICGRLVSGWLIRIAVFCIERNFLLRKRVLYFVYGVKHAVQNCVWLGLVLIAWHFLFDQKVQREVHSNFLEYITKFLVCLLVGTLVWLVKTLMVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLVELQRYEDEDKGFLKMSRSYRKPELPYLLT* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3910 396 MobiDBLite consensus disorder prediction 65 94 - -
Amo19g3910 396 MobiDBLite consensus disorder prediction 29 43 - -
Amo19g3910 396 MobiDBLite consensus disorder prediction 95 129 - -
Amo19g3910 396 MobiDBLite consensus disorder prediction 136 151 - -
Amo19g3910 396 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 1 375 IPR016688 -
Amo19g3910 396 MobiDBLite consensus disorder prediction 160 179 - -
Amo19g3910 396 MobiDBLite consensus disorder prediction 1 151 - -
Amo19g3910 396 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 1 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3910 Amo-Chr19 154849186 154850376 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3910 89 371 Mechanosensitive Ion Channel Family AT1G78610 60.825 2.78e-117 359
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g3910 19 154849186 154850376 Amo19g3910 19 154849186 154850376 ECH