Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3891 ATGTCTAGAACATCCAGTGTCCCACCTGCCTTCCAATCTATCAAGTCATTGCCTCCCGACTTCAAAGTTGCCAATAATCTGAACGGTGGTCTTTCAAGCAAGAATGGAGATGTTAGATTGAGAAGCGGTGATCCAGTTCGATCAAGTAGTCCTGCAAATGGTGCACTAGTAGTGGAGGTTTCTAAGGAAGTTCACGACTGTGCTAGCAACATGGATGTTTTCGATGAGGATTCGCCTTATAGTGGACAGCTTAGGTTGTTAGAAGAAGACAGGCCATCAAATGGGGATGAAGACTCAGAATCTGTTCCTTTGCCCCTCTCTTCAAATTCTACATCCTCTAGAGAAAGCAGGTGGTGTGATACAACTCCTTATGCTTCAAAGAAGAAGGTTCAGTGTTGGCTTCAACTTTCAAATGGGAATTGGGAGCTGGTGAAGATAATAACATCTTCTGGAACTGAGTCTGTTGTTTCACTGCCTGATGGGAAAGTTTTAAAGGTACACGATGAAAGCTTAGTATCAGCAAACCCTGATATTCTTGATGGAGTGGATGACCTCATGCAACTTAGTTATTTAAACGAACCTTCAGTCTTATACAACTTACAATATAGATACAACCAGAATATGATCTATGTAAGTCTTTATATTGCTGATTTTTTCCCCTCATCAATTTGCTTCCTTATCATAAGTCATAACAGCTTTATGGGCATATCTTGTACAATTCAGACAAAAGCAGGGCCTGTTTTGGTTGCCATAAATCCCTTCAAGAAAGTTCCTCTGTATGGTAATGATTATATTGAAGCCTACAAGCGTAAAAGAATTGAAAGTCCTCATGTGTATGCCATTACTGACACAGCCATCCGAGAAATGATACGGGATGAAGTAAATCAATCTATAATTATAAGTGGCGAGAGTGGAGCAGGGAAGACTGAGACAGCAAAGATAGCAATGCAGTACTTAGCTGCCCTTGGTGGTGGAAGTGGAATAGAGTATGAGATATTGAAGACTAATCCAATACTAGAAGCCTTTGGTAATGGAAAAACATTGAGAAATGACAACTCAAGTCGTTTTGGGAAGCTCATTGAGATTCACTTCAGTGAAACTGGAAAAATATGTGGTGCTAATATCCAAACATTTCTTCTGGAAAAGTCTAGAGTTGTCCAATGCAATGAAGGTGAAAGGTCCTATCATATATTTTATCAGCTATGTGCTGGGGCGCCACCATCTCTAAGGGAGAAGCTAAATCTAAGAAGTGCTGAAGAATACAAATATCTTAGGCAGAGCAATTGTTACTCAATTGTTGGTGTTAATGATGCAGAAGAATTTCGCATAGTCGTGGAAGCACTGGATGTTGTCCATATTAGCAAAGAAGACCAGGAGAGTGTATTTGCAATGCTTGCTGCGGTATTATGGTTAGGAAATGTATCGTTTACAGTGATTGATAATGAAAATCATGTTCAAGCTGTTGAAGATGAGGGGCTGTTCAGCGTTGCCAAGTTGATTGGCTGTGACATTGAAGATCTCAAGTTTACATTAACAACTCGCAAAATGAAAGTTGGTAATGATAATATTGTCCAAAAGTTGAAACTTTCTCAGGCTATTGATGCAAGAGATGCTTTGGCGAAGTCAATATATTCCTGTTTGTTTGATTGGATAGTTGAACAAATAAACAAATCTCTTGCTGTTGGTAAAAGACGCACAGGCAGATCAATAAGTATTCTAGATATCTATGGCTTTGAATCATTCAATAGGAACAGTTTTGAGCAGTTCTGCATAAATTATGCTAATGAGAGATTACAGCAACACTTCAATCGTCATTTGTTTAAGTTAGAACAAGAGGAATATATACAAGATGGGATTGATTGGGCTAAAGTTGAATTTGAAGATAACCAAGATTGCCTTAATCTTTTTGAAAAGAAACCATTGGGCTTACTATCCCTGTTGGACGAAGAGTCCACATTCCCAAATGGCACAGATTTAACATTTGCCAACAAGCTTAAGCAACATTTGAATTCTAATTCTTGCTTCAAAGGAGAACGAGACAAGGCCTTTACCGTATGTCATTATGCAGGGGAGGTAATTTATGATACAACTGGATTCCTGGAGAAGAACAGAGACTTGTTGCACTTGGATTCCATCCAACTTCTCTCCTCAAGTACATGTCATCTTCCTCAGAAATTTGCGACCCAAATGCTTACTCAGACTGAGAAGCCTGCAGTTGGTCCCTTACACAAGTCAGGTGGAGCAGATTCCCAAAAGCTAAGTGTTGCCACAAAATTCAAGGGACAACTATTCCAACTGATGCAACGATTAGAGAGCACTACACCACATTTTATCCGCTGCATTAAACCTAATAACCTCCAATCACCTGGATTATACGAGCAAGGCCTCGTACTGCAGCAGCTGAGATGTTGTGGGGTCCTGGAAGTAGTTCGAATATCTAGATCAGGCTTTCCCACTAGAATGTCCCACCAAAAGTTTGCCAGAAGATATGGTTTTCTTCTCCTTGAAAATGTTGCATCTCAAGATCCACTTAGCGTTTCTGTTGCAATTCTTCATCAGTTTAACATTTTGCCAGAAATGTATCAAGTTGGTTACACAAAACTATTTTTCAGAACAGGACAGGTTGGAGTGCTTGAAGATACTAGAAATCGTACGCTCCATGGAATTTTGCGTGTGCAAAGTTGCTTCAGGGGTTACCAAGCTCGTTTGTACCGCAAAAATCTTTGGAGATCAATCACTACTCTTCAATCATTTATCAGGGGAGAGAAAAGCAGAAAGGAATATGCAGCTTCAGTGCACAGACATAGAGCTGCTGTGGTTATACAAAAGAAGACGAAAACAATATTGGCGAGAAACAGATTGAAGACTACCATTGATGCTGCAGTTGTCATACAATCATTTATCCGTGGTTGGTTAGTCAGAAGATGCTCAGGGGATCTAAGTTTACTGAAATCTGGAGGCACAAAGACTAATGAGTCAGATGAGGTTCTGGTGAAGTCATCTTTCCTAGCTGAATTACAACGCCGGGTACTTAAAGCTGAAGCTGCCCTCAGAGAGAAAGAAGAGGAAAATGACATCCTACAACAACGTCTTCAACAGTATGATAACAGATGGTCTGAATATGAATTGAAGATGAAATCCATGGAAGAAGTGTGGCAGAAACAAATGAGATCCCTACAATCTAGCCTATCCATTGCAAAGAAGAGTCTTGCTATGGATGATTCTGAAAGGAATTCAGATGCATCTGTTAATGCAAGTGATGACAGGGATTATAGCTGGGATATGGGAGGTAATCATAGGCGCCAAGAAAGCACTGGAACAAGATCAATGAGTGCTGGTTTAAGTGTTATAAGCCGGTTGGCCGAAGAATTCGAGCAGAGGAGTCAAGTTTTTGGTGATGATGCAAAGTTCTTGGTTGAAGTAAAATCTGGCCAAGTTGAAGCCAGTTTGAACCCAGACAAAGAACTTAGGAGATTAAAGCAGATGTTTGAAGCTTGGAAGAAGGACTATGGAGCAAGACTGAGGGAAACAAAGGTCATTTTGAATAAGCTTGGAAGTGAAGATGGGTCAATTGAGAAAGCCAAGAAGAAATGGTGGGGAAGAAGGAATAGCACAAGGATGAATTGA 3627 0.4017 MSRTSSVPPAFQSIKSLPPDFKVANNLNGGLSSKNGDVRLRSGDPVRSSSPANGALVVEVSKEVHDCASNMDVFDEDSPYSGQLRLLEEDRPSNGDEDSESVPLPLSSNSTSSRESRWCDTTPYASKKKVQCWLQLSNGNWELVKIITSSGTESVVSLPDGKVLKVHDESLVSANPDILDGVDDLMQLSYLNEPSVLYNLQYRYNQNMIYVSLYIADFFPSSICFLIISHNSFMGISCTIQTKAGPVLVAINPFKKVPLYGNDYIEAYKRKRIESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNGKTLRNDNSSRFGKLIEIHFSETGKICGANIQTFLLEKSRVVQCNEGERSYHIFYQLCAGAPPSLREKLNLRSAEEYKYLRQSNCYSIVGVNDAEEFRIVVEALDVVHISKEDQESVFAMLAAVLWLGNVSFTVIDNENHVQAVEDEGLFSVAKLIGCDIEDLKFTLTTRKMKVGNDNIVQKLKLSQAIDARDALAKSIYSCLFDWIVEQINKSLAVGKRRTGRSISILDIYGFESFNRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNSCFKGERDKAFTVCHYAGEVIYDTTGFLEKNRDLLHLDSIQLLSSSTCHLPQKFATQMLTQTEKPAVGPLHKSGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNLQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLENVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQVGVLEDTRNRTLHGILRVQSCFRGYQARLYRKNLWRSITTLQSFIRGEKSRKEYAASVHRHRAAVVIQKKTKTILARNRLKTTIDAAVVIQSFIRGWLVRRCSGDLSLLKSGGTKTNESDEVLVKSSFLAELQRRVLKAEAALREKEEENDILQQRLQQYDNRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAMDDSERNSDASVNASDDRDYSWDMGGNHRRQESTGTRSMSAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVEASLNPDKELRRLKQMFEAWKKDYGARLRETKVILNKLGSEDGSIEKAKKKWWGRRNSTRMN* 1209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3891 1208 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 239 1208 - -
Amo19g3891 1208 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 929 IPR027417 -
Amo19g3891 1208 MobiDBLite consensus disorder prediction 1070 1084 - -
Amo19g3891 1208 Gene3D - 393 449 - -
Amo19g3891 1208 Gene3D Kinesin motor domain 179 816 IPR036961 -
Amo19g3891 1208 MobiDBLite consensus disorder prediction 1070 1109 - -
Amo19g3891 1208 PANTHER MYOSIN 239 1208 - -
Amo19g3891 1208 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 9 211 - -
Amo19g3891 1208 CDD MYSc_Myo8 194 871 IPR036022 -
Amo19g3891 1208 ProSiteProfiles Myosin motor domain profile. 180 883 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo19g3891 1208 PRINTS Myosin heavy chain signature 622 650 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo19g3891 1208 PRINTS Myosin heavy chain signature 569 597 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo19g3891 1208 PRINTS Myosin heavy chain signature 337 364 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo19g3891 1208 PRINTS Myosin heavy chain signature 295 320 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo19g3891 1208 PRINTS Myosin heavy chain signature 241 260 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo19g3891 1208 Gene3D - 936 980 - -
Amo19g3891 1208 Gene3D - 887 935 - -
Amo19g3891 1208 ProSiteProfiles IQ motif profile. 910 937 IPR000048 GO:0005515
Amo19g3891 1208 Gene3D - 817 884 - -
Amo19g3891 1208 MobiDBLite consensus disorder prediction 25 54 - -
Amo19g3891 1208 MobiDBLite consensus disorder prediction 89 118 - -
Amo19g3891 1208 ProSiteProfiles IQ motif profile. 959 986 IPR000048 GO:0005515
Amo19g3891 1208 Gene3D - 581 773 - -
Amo19g3891 1208 Pfam IQ calmodulin-binding motif 910 928 IPR000048 GO:0005515
Amo19g3891 1208 Pfam IQ calmodulin-binding motif 959 975 IPR000048 GO:0005515
Amo19g3891 1208 SMART MYSc_2a 174 884 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo19g3891 1208 Gene3D Myosin VI head, motor domain, U50 subdomain 450 558 - -
Amo19g3891 1208 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 127 176 IPR004009 GO:0003774|GO:0005524|GO:0016459
Amo19g3891 1208 SMART iq_5 884 906 IPR000048 GO:0005515
Amo19g3891 1208 SMART iq_5 933 955 IPR000048 GO:0005515
Amo19g3891 1208 SMART iq_5 907 929 IPR000048 GO:0005515
Amo19g3891 1208 SMART iq_5 956 978 IPR000048 GO:0005515
Amo19g3891 1208 ProSiteProfiles IQ motif profile. 887 914 IPR000048 GO:0005515
Amo19g3891 1208 Coils Coil 1003 1044 - -
Amo19g3891 1208 Pfam Myosin head (motor domain) 239 871 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo19g3891 1208 MobiDBLite consensus disorder prediction 100 118 - -
Amo19g3891 1208 PANTHER MYOSIN 9 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3891 Amo-Chr19 154602774 154612171 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3891 7 1206 Myosins gene family AT1G50360 73.179 0.0 1786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3891 - - gmx:100782618 2007.26