Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3870 ATGTCTAACACCGACGGAACCTCTAACGCCGTTACCAACATTGACACACACCGTCACCACTCACAGCAACAACCAACTAACGGCGCCCTCGTCGTCAAAAAGCCCCCATCCAAAGACCGACACAGCAAGGTCGACGGACGCGGCCGCCGTATTCGGATGCCTATCATCTGCGCCGCCCGCGTCTTCCAGCTCACCCGCGAGCTCGGCCACAAGTCCGACGGCCAGACCATCGAGTGGCTCCTCCGCCAGGCCGAGCCCTCAATCATCGCCGCCACCGGAACTGGAACCACTCCCGCCAGCTTCTCCTCCGTTTCCGTCTCCGTACGAGGCGGTGCTGGCTCTCTCTCTTCTCCTTCCTCAACCTCCGCAGCGTCTTCGCTCGACCACAAGCCCTTGCTCGCTCCCACTCCCTTCATACTCGGCAAGCGCATACGCACCGACGACGACGCTTCCGCCAAGGACGACGGCGTCTCCGTGGGGCCCGCCGTGGGGTCCTTAGTGGGCCCCGGAGCTCCCGCGGGGCTCTGGGCCCTCCCGYCCAGGCCCGATTTCGGTCAAATTTGGAGTTTCGCAYCGGCTGWTCCTCCGCCGGAGATGGTTGTGCAGTCGGCGGCGGTGTCGGTGTCTCAGCAGCAGCAAGCTTCTTTGTTCGTTCACCATCAYCATCAGCAGCAGCAACAAGCCATGGGAGAAGCTTCGGCGGCGAGGCTGGGAAATTACCTTCCTGGACATCTGAATTTGCTGGCTTCTTTGTCGGGAGGGCCCGGAAACTCCGGCCGGAGAGACGATGAGCCTCGCTGA 801 0.623 MSNTDGTSNAVTNIDTHRHHSQQQPTNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSVSVSVRGGAGSLSSPSSTSAASSLDHKPLLAPTPFILGKRIRTDDDASAKDDGVSVGPAVGSLVGPGAPAGLWALPXRPDFGQIWSFAXAXPPPEMVVQSAAVSVSQQQQASLFVHHHHQQQQQAMGEASAARLGNYLPGHLNLLASLSGGPGNSGRRDDEPR* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3870 266 MobiDBLite consensus disorder prediction 100 127 - -
Amo19g3870 266 MobiDBLite consensus disorder prediction 34 49 - -
Amo19g3870 266 MobiDBLite consensus disorder prediction 1 30 - -
Amo19g3870 266 MobiDBLite consensus disorder prediction 100 128 - -
Amo19g3870 266 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 263 IPR005333 GO:0003700
Amo19g3870 266 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 1 263 - -
Amo19g3870 266 ProSiteProfiles TCP domain profile. 37 91 IPR017887 -
Amo19g3870 266 MobiDBLite consensus disorder prediction 1 49 - -
Amo19g3870 266 Pfam TCP family transcription factor 37 142 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3870 Amo-Chr19 154419024 154421406 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3870 22 266 TCP Transcription Factor Family AT5G23280 65.726 1.13e-95 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Amo19g3870 TCP 4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3870 K16221 - cpap:110813909 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g3870 19 154419024 154421406 Amo19g3870 19 154419024 154421406 ECH