Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3840 ATGGAAGACATCAAGGTGCTAGGGTTCTGGTCAAGCCCTTATGTCCACCGAGTGATATGGGCTCTGAAGCTGAAGGGCATCAGCTACGAGTACATAGAAGTGGAGAGGCATGGCAAAAGTCAACTATTGCTCCAATCCAATCCTGTTTACAATAAGGTCCCTGTTCTTATTCATGGAGGCAAATCCATTGCAGAATCCATGGTCATTCTTCAATATATTGAAGATACCTGGCCTCACAATCCCTTGCTTCCTCAAGATCCCTATGAGAGAGCCTTAGCCAGATTTTGGATCAAATTTGGAGAAGATTCGACAGCTTCTATTACTGATCTGTTTATGAGACCCTCAAAGGATGAAGAAGAGGGGGCAATTGCAATTGAGAAAGCAAAAGAAACTCTGAAGGTAATGGAAGAGAAAGGACTAGGAGACAAGAAGTTCTTTGGAGGCAACAACATTGGAATGGTGGACATAGCTTATGGATTGCTTTGTCATTGGTTAGAAGGGTTGGAGGAAATTACAGGGTTGAAACTAATTGATCCAAGCCAATTCCCTCGGTTGCATGCATGGACTCAAAATTTCAAGCAAGTTCCTCTGATTAAGGAAAACCTTCCTGATTATGAAAAACTCTTGGTCCATCTTCAATGGCGTAGACAGCAATATATGTAA 663 0.4223 MEDIKVLGFWSSPYVHRVIWALKLKGISYEYIEVERHGKSQLLLQSNPVYNKVPVLIHGGKSIAESMVILQYIEDTWPHNPLLPQDPYERALARFWIKFGEDSTASITDLFMRPSKDEEEGAIAIEKAKETLKVMEEKGLGDKKFFGGNNIGMVDIAYGLLCHWLEGLEEITGLKLIDPSQFPRLHAWTQNFKQVPLIKENLPDYEKLLVHLQWRRQQYM* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3840 220 Pfam Glutathione S-transferase, N-terminal domain 3 74 IPR004045 -
Amo19g3840 220 SFLD Glutathione Transferase (cytosolic) 1 219 IPR040079 -
Amo19g3840 220 CDD GST_N_Tau 4 77 - -
Amo19g3840 220 CDD GST_C_Tau 87 215 IPR045074 GO:0004364|GO:0006749
Amo19g3840 220 SUPERFAMILY GST C-terminal domain-like 75 218 IPR036282 -
Amo19g3840 220 SFLD Main.3: Omega- and Tau-like 1 219 IPR045073 -
Amo19g3840 220 PANTHER GLUTATHIONE TRANSFERASE GST 23-LIKE 1 217 - -
Amo19g3840 220 Pfam Glutathione S-transferase, C-terminal domain 110 193 IPR004046 -
Amo19g3840 220 SUPERFAMILY Thioredoxin-like 3 102 IPR036249 -
Amo19g3840 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 217 IPR045073 -
Amo19g3840 220 Gene3D - 83 219 - -
Amo19g3840 220 Gene3D Glutaredoxin 1 82 - -
Amo19g3840 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Amo19g3840 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 220 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3840 Amo-Chr19 154234258 154235402 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3840 2 213 Glutathione S-transferase Gene Family AT3G09270 47.442 5.96e-60 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3840 K00799 - gmx:547586 367.851