Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3825 ATGGAAGATACTTTGGCTTCAACTAGTTCTTCAACAGCAATCAACTCTTCCAATATAGGGTTTCAGCTATTGAAGAAGCATGGTTGGAAAGAAGGCACCGGTCTTGGGGTCTCTGAGCAGGGTAGATTAGAGCCTGTAGAAACATATGTGAAGAATAATAAGCGAGGTTTGGGAGCAGATAAAGCGAAGAAAAAGGCTGTCAAACCTGTTCATACTGATGATGGTTCTAGGGAAAACAATAAGCAGGAAACTAAGAAGAAAACCAAAGCACTTTCTAAACGGATTAGAAAGATGGAGGAGTTTGAGAAGAAGATGCAAGAGAAGGAATTTGAGCGTGCTTTCTTCAGGGAGTTCTGGCCAGAAAATGTATAA 372 0.4086 MEDTLASTSSSTAINSSNIGFQLLKKHGWKEGTGLGVSEQGRLEPVETYVKNNKRGLGADKAKKKAVKPVHTDDGSRENNKQETKKKTKALSKRIRKMEEFEKKMQEKEFERAFFREFWPENV* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3825 123 PANTHER BAT4 PROTEIN-RELATED 4 123 IPR039146 -
Amo19g3825 123 MobiDBLite consensus disorder prediction 51 91 - -
Amo19g3825 123 MobiDBLite consensus disorder prediction 54 86 - -
Amo19g3825 123 ProSiteProfiles G-patch domain profile. 16 62 IPR000467 GO:0003676
Amo19g3825 123 SMART G-patch_5 14 60 IPR000467 GO:0003676
Amo19g3825 123 Pfam G-patch domain 17 59 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3825 Amo-Chr19 153999930 154001888 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3825 1 58 C2H2 Transcription Factor Family AT5G26610 46.552 1.32e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3825 - - cam:101497292 155.606
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g3825 19 153999930 154001888 Amo19g3825 19 153999930 154001888 ECH