Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3814 ATGGTGGTGAAGATGATAGAATGGCAGAAGCAGTTACAGAATAATGAGAAGGCAGATCGTACTAACAACAATATGATGTTTGTGAAGGTTATGACTGATGAACAGTTAGAAACTCTGAGGAAGCAGATTGCGGTTTATGCCACTCTCTGTGACCAGCTCGTTGAGATGCATAGAACACTCTCCACTCACCACGATCTTACAGGAGTTCGGGTGGGAAATATATACTGCGATTCATTGATGACATCAGCAGGGCAGAAAATAACGTCTAGGCAGAGGTGGACACCAACACCATTGCAGCTTCAAATTCTTGAGCGGATATTTGATCAAGGAAATGGAACTCCAAGCAAGGAGAAGATTAAAGAGATCACTGCTGAACTTAGCCACCATGGCCAGATTTCTGAAACAAATGTATACAATTGGTTCCAAAACAGGCGTGCAAGATCAAAGAGGAAGCTTCAAAATAATGTGCCACCTACTACTATTGAATCAGAAGTAGATGCTGAGGTTGATTCTAAGGATAAGAAGACAAGGCCAGAGGAGTTAATTGGTTCCCAACAACAACAACATAGTACCATCATAATGACTAATGCTTCTGCTACTAATAGGCCAGAAAAGTTGTGCTTTCAAAACCCTGAGTTGCAGTATTTAAATAATCAACATCCAAACAAGAACAACAAATCAGATCCCATTTTCACATCAGATGGCACTCTAAGACCCTTAAGGAATTTTAGTCGTATGCCTGTTTTTGATGATGTTCTATCAAACTCAAGGGGAGATTATCTAGATGGAAAAATGGAAGTAGGTGGAATGTATAATTTATATCAGCAAGGAGGAGACTACAACTTGGGGGGTTGA 855 0.4035 MVVKMIEWQKQLQNNEKADRTNNNMMFVKVMTDEQLETLRKQIAVYATLCDQLVEMHRTLSTHHDLTGVRVGNIYCDSLMTSAGQKITSRQRWTPTPLQLQILERIFDQGNGTPSKEKIKEITAELSHHGQISETNVYNWFQNRRARSKRKLQNNVPPTTIESEVDAEVDSKDKKTRPEELIGSQQQQHSTIIMTNASATNRPEKLCFQNPELQYLNNQHPNKNNKSDPIFTSDGTLRPLRNFSRMPVFDDVLSNSRGDYLDGKMEVGGMYNLYQQGGDYNLGG* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3814 284 MobiDBLite consensus disorder prediction 149 190 - -
Amo19g3814 284 CDD homeodomain 90 151 IPR001356 GO:0003677
Amo19g3814 284 PANTHER - 5 282 - -
Amo19g3814 284 ProSiteProfiles 'Homeobox' domain profile. 86 151 IPR001356 GO:0003677
Amo19g3814 284 Gene3D - 91 156 - -
Amo19g3814 284 SUPERFAMILY Homeodomain-like 88 153 IPR009057 -
Amo19g3814 284 SMART HOX_1 88 155 IPR001356 GO:0003677
Amo19g3814 284 Pfam Homeodomain 90 150 IPR001356 GO:0003677
Amo19g3814 284 MobiDBLite consensus disorder prediction 165 180 - -
Amo19g3814 284 PANTHER WUSCHEL-RELATED HOMEOBOX 13 5 282 IPR044559 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3814 Amo-Chr19 153950211 153952757 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3814 5 284 Wox Gene Family AT4G35550 47.651 2.69e-80 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Amo19g3814 Homeodomain 1e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3814 - - ahf:112777216 580.482