Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3811 ATGCATAAAAACTTCTGGACGGCACAGGATACTGGCTGCTTAACTGAAGAAAATATGGGATATGAGAATGTTTCTAGAACTGAACAAAAGCGTGGTCATCAGTGGTTTATGGATTCAGGTGAAATGCAAGTATTCAGCAACATTAAGAGGCAGGCAGTTGAATCTGTTAACGGGAACCCAATTTCAGGAGTTTCTCATGTAAATATTTCTCCATGGGACATCAATTCAGGATTTCATTCAGTTACAGGACAATTTTCTGACCGTCTCTTTGGATCTGAGCTACGAGCTCTCAATATGGTTGATAAGAACATGACATCAATTAGAAGTGGTAACTTGAACACAGGAAGCAAGGATTTTGAGAATCAATATGTTAATAATCCATCAGTGGGTTTATCAATATCCCATAATATTGAGGACCCTTCACCATGTCTCAATTTCGGTGGAATCAGAAAAGTCAAAGTTAATCAAGTAAGAGATTCTGACAGTTGTATGCCTTCATCCATGGGGAACTCCTATGGCAATGCTGATAATTGTTTAATGTCAATAGGTTCTGGGTATAGCAAGGATGATGGAAACATATCATTGGGCCCAACCTTTAACAATATAAATGATAATTCCATCTCTATGCAGACCTCAATAAGTAAGACCAATGGCAATCTTGTTCCAATGGATCATGCCTTCAGTAAGGGGGATGGTAGTTTTATGTTGATGGGGCACAATTATTGCAAAGGGGATGAAAATATTTTATCAATGAATCAGCCCTTTGACAGGGGAGATGGAAATTTCATATCAATGGGCCAAACATATGACAAGGAAGATGACAATGTGATATCTCTGGCTACCTCTTATAACAAGGGGCATGAGAACTTTATGTCAATGGGTCCAACCTACAGTAAATCTGGAGAAAATTTCATAAATATTGGTGCTTCATATGACAAGGGCACTGATCATATAATGTTGATAGGTACAACATATGATAAGGTAGATTCAAATATTGCATCGACAGTCCTTTCACATGAGAAAGGAGACTCCAACTCCTTACAAGTGACCGAAAACCATAGTAAGGGTGAGGCAAATACGATATCTTTTGGAAGTGTTCATGAGGGCTGTGAACGAAATCTTAATGGAGGGATCATTAGTGGTTATGATCTGTTGATGGGCAACCAGACTTCAGCTCGTGATTTGGATGGGCAGAAGACTGTGACTGAGTCAAACTCTGAACTACCTACAGATAGCACTCCAAAATCCAATCCTAGTACTGATTCTACACTTAAGAATAAAGATCCAAAGACAACCAAGAAGGCTTCTGCTAACAACTTTCCTTCAAATGTTAAAAGTTTGTTATCAACTGGTATTTTTGATGGTGTTCCTGTGAAATATGTTTCCTGGTCAAGAGAGAGAACTCTCAGAGGAATCATAAAGGGAACTGGATATCTGTGTTCATGTGATGACTGCAAACAGTCCAAGGCTCTTAATGCATATGAATTTGAGCGTCATGCTGGTGCCAAGACCAAACACCCTAACAATCACATATATTTTGACAATGGAAAAACTATCTATGCTGTTGTTCAAGAGCTGAAAAGCTCTCCTCAGGAGATGCTTTTTGATGCAATTCAAAGTGCATCTGGCTCTACCATCAACCAGAAGAACTTCCGCATTTGGAAAGCATCATATCAAGCTGCAACTCGGGAGCTTCAGCGGATCTATGGAAAGGACGAAATATCTTGTCACATTTCAGGGAACAAACTATTTTAA 1755 0.3909 MHKNFWTAQDTGCLTEENMGYENVSRTEQKRGHQWFMDSGEMQVFSNIKRQAVESVNGNPISGVSHVNISPWDINSGFHSVTGQFSDRLFGSELRALNMVDKNMTSIRSGNLNTGSKDFENQYVNNPSVGLSISHNIEDPSPCLNFGGIRKVKVNQVRDSDSCMPSSMGNSYGNADNCLMSIGSGYSKDDGNISLGPTFNNINDNSISMQTSISKTNGNLVPMDHAFSKGDGSFMLMGHNYCKGDENILSMNQPFDRGDGNFISMGQTYDKEDDNVISLATSYNKGHENFMSMGPTYSKSGENFINIGASYDKGTDHIMLIGTTYDKVDSNIASTVLSHEKGDSNSLQVTENHSKGEANTISFGSVHEGCERNLNGGIISGYDLLMGNQTSARDLDGQKTVTESNSELPTDSTPKSNPSTDSTLKNKDPKTTKKASANNFPSNVKSLLSTGIFDGVPVKYVSWSRERTLRGIIKGTGYLCSCDDCKQSKALNAYEFERHAGAKTKHPNNHIYFDNGKTIYAVVQELKSSPQEMLFDAIQSASGSTINQKNFRIWKASYQAATRELQRIYGKDEISCHISGNKLF* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3811 584 MobiDBLite consensus disorder prediction 399 425 - -
Amo19g3811 584 PANTHER AUTOIMMUNE REGULATOR 2 575 - -
Amo19g3811 584 Pfam Tify domain binding domain 471 526 IPR032308 -
Amo19g3811 584 PANTHER N-LYSINE METHYLTRANSFERASE 2 575 - -
Amo19g3811 584 MobiDBLite consensus disorder prediction 399 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3811 Amo-Chr19 153932361 153935957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3811 430 559 PHD Transcription Factor Family AT3G53680 54.615 1.07e-40 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3811 - - gmx:100782217 850.892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g3811 19 153932361 153935957 Amo19g3811 19 153932361 153935957 ECH