Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3793 ATGATTTCTAATAACGAAGACCGTTCCGCCACCGCGGCCCGAGCTGCAGCTTCTTCTTCTTCTTCTTCAAGTGATGATCGGCCCGCACCGCCGGCAGCACCCAACATTGTGATGTCGTCGAAGGATCACGATTCTCTCTTCAGCGGTGGTGGCATCAGCTTTCTCTCTGGAAGTCGAAATGGAAGATTTAGCTATGGATATTCCAGTTTCAAGGGTAAAAGGTCTTCAATGGAGGATTTTTTTGAGACCAAGATATCAGAGGTTGATGGTCAGACTGTTGCCTTTTTTGGTGTTTTTGATGGTCATGGAGGTTCCCGAACTGCAGAATACCTGAAGGATAATCTGTTTAAAAATTTAAGTAGCCATCCTGACTTTATCAAAGACACAAAGACTGCTATTGTTGAAGCATTTAAACAAACAGATGTTGATTATCTCAATGAGGAAAAGGGCCATCAGAGGGATGCTGGGTCCACTGCATCAACAGCTATGTTGTTGGGCGACCGAATTCTTGTTGCAAATGTTGGCGATTCCAGAGTAGTTGCATCCAGAGCTGGTACAGCTGTTCCTTTGTCTATCGATCACAAACCTGATAGATCTGATGAGCGTCAAAGGATTGAGGAGGCAGGGGGATTCATAATTTGGGCAGGGACATGGAGAGTTGGTGGTGTTCTTGCTGTTTCCCGTGCATTTGGAGATAAACTTCTTAAACCATACGTTGTTGCTGACCCAGAGATTAAGGAAGAAGAAATAGATGGTGTGGATTTTATCATAATCGCCAGTGATGGTCTTTGGAATGTCATATCAAACAAGGAGGCAGTGTCTTTAGTACAAAATATCACAGATGCAGAAGTGGCGTCCAGAGAACTCATTAAAGAAGCTTATGCGCGAGGAAGCTCAGACAACATCACTTGTGTCGTCGTTCGATTTGATCTCTCCTGA 939 0.4441 MISNNEDRSATAARAAASSSSSSSDDRPAPPAAPNIVMSSKDHDSLFSGGGISFLSGSRNGRFSYGYSSFKGKRSSMEDFFETKISEVDGQTVAFFGVFDGHGGSRTAEYLKDNLFKNLSSHPDFIKDTKTAIVEAFKQTDVDYLNEEKGHQRDAGSTASTAMLLGDRILVANVGDSRVVASRAGTAVPLSIDHKPDRSDERQRIEEAGGFIIWAGTWRVGGVLAVSRAFGDKLLKPYVVADPEIKEEEIDGVDFIIIASDGLWNVISNKEAVSLVQNITDAEVASRELIKEAYARGSSDNITCVVVRFDLS* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3793 312 MobiDBLite consensus disorder prediction 1 40 - -
Amo19g3793 312 ProSitePatterns PPM-type phosphatase domain signature. 95 103 IPR000222 GO:0043169
Amo19g3793 312 Gene3D - 57 311 IPR036457 -
Amo19g3793 312 CDD PP2Cc 63 309 IPR001932 -
Amo19g3793 312 SUPERFAMILY PP2C-like 57 310 IPR036457 -
Amo19g3793 312 SMART PP2C_4 53 307 IPR001932 -
Amo19g3793 312 ProSiteProfiles PPM-type phosphatase domain profile. 64 309 IPR001932 -
Amo19g3793 312 PANTHER ALPHABET, ISOFORM E-RELATED 30 312 - -
Amo19g3793 312 PANTHER PROTEIN PHOSPHATASE 2C 11-RELATED 30 312 - -
Amo19g3793 312 MobiDBLite consensus disorder prediction 1 28 - -
Amo19g3793 312 Pfam Protein phosphatase 2C 65 302 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3793 Amo-Chr19 153652859 153657499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3793 36 312 PP2C-type Phosphatase Gene Family AT1G43900 73.285 2.87e-156 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3793 K17506 - gmx:100776867 542.347