Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3779 ATGTCATCTCGCGTTGTAGCAGACAATGCATTACCTGTAACCAATACGACGCCGTATTTTGGAATGACGGAACTCGACGATTACACGCGGCGTTCAGCCGCCATCGGCGGGTCTCCTACTCTGGGACAGCTCCTGAAACACGTTGGCGACGTGCGTAAGGAAGTTGTTGGCGACGGAAGTGAGACGCCGGTGCACCAAGCTCTCGAGATTGGTGACGACGGCGTCGGAATAGAGCCACGCTCACTGCCGTTTGTACTCTCCTTCAACAATTTGACCTACAGCGTCAAAGTCCGTCGGAAACTGACTTTCTCGGCGATACTTCCTCGGCGCCGGAGCCGTCTCGGCGCGGCGGCGGATTCGGAAGCACCGGCAGTGGGAGATAGAATGTTCTCACGGACCAAGACTCTGCTAAACGACATCTCCGGCGAGGCTCGCGACGGCGAGATCATGGCGGTTCTTGGCGCCAGTGGCTCTGGAAAATCCACCTTGATCGACGCACTGGCGAACCGCATCGCTAAGGGAAGGTTGAAAGGAACGGTGGCACTGAATGGCGAGGCGCTGGATTCTCGCCTCCTGAAGGTTATCTCCGCCTACGTGATGCAAGACGACCTCCTCTTCCCCATGCTCACCGTCGAAGAAACACTCATGTTCGCCGCCGAGTTCCGCTTGCCCCGCACACTCTCTAAATCAAAGAAGAAAGCACGTGTCCAAGCACTAATCGACCAGCTAGGTATCCGAAATGCCGCGAAAACTGTCATCGGAGACGAAGGCCACCGCGGAGTATCCGGCGGAGAGCGTCGTCGAGTGTCAATCGGAATCGACATAATCCACGACCCTATCATCCTCTTTCTTGACGAGCCAACCTCCGGACTTGACTCCACGAGCGCATTCATGGTGGTGAAGGTTCTACAAAGAATCGCACAGAGCGGAAGCATCGTTATCATGTCCATCCACCAGCCGAGTTACCGAATCTTAGGGCTTCTCGACCGAATGATCTTCCTCTCACGTGGCCAAACCGTCTACAGCGGCTCACCGGCTCAGCTTCCGTCGTTCTTCGCGGAGTTCGGACACCCTATACCGGACGCAGAGAACCGAACCGAGTTCGCATTGGACCTCATTCGGGATCTAGAAGGTTCCCCAGGCGGAACCAAAAGCTTAGTAGAGTTCAACAAGTCCTGGCAGTCCATGAAGCACCCTGCACCCGCAGCACACAGTAACAACACCGTCAACGACCAAAACGGCATGTCGTTGAAGGAAGCAATAAGCGCAAGCATTTCGCGCGGGAAACTAGTCTCAGGCGCAAGCGCAACCAACACGAATTCTTCAAATCCTTCTTCAATGGTTCCAACCTTCGCRAACCCGATCTGGATGGAGATGGCCACACTATCAAAACGYTCGTTCTTGAACTCTCGAAGAATGCCAGAGCTTTTCGGGATTCGGTTAGGTGCGGTTATGGTGACAGGATTCATCCTAGCAACCATGTTCTGGAAGCTCGATAACTCCCCGAAAGGAGTGCAAGAAAGGCTCGGGTTCTTCGCATTCGCCATGTCCACCACCTTCTACACCACCGCAGACGCGCTCCCAGTGTTCCTCCAAGAACGYTATATCTTCATGCGMGAAACAGCKTACAACGCATACAGAAGATCCTCCTATCTTGTTTCCCACGCKCTCGTCTCGTTGCCTTCGCTGYTGTTCCTCTCATTGGCGTTCTCATCAATCACGTTTTGGGCCGTGGGCCTTGACGGTGGTATTTCGGGCTTTYTGTTTTACTTTTTGATAATATTCGCTTCATTTTGGGCCGGGAACTCGTTTGTTACATTTCTGTCCGGTGTGGTGCCTCATGTTATGCTGGGATACACAATTGTGGTGGCAATTCTTGCGTACTTCTTGCTCTTCAGTGGCTTCTTCATCAACAGGGATAGGATTCCAAGTTACTGGATTTGGTTCCATTACATGTCACTTGTGAAGTACCCTTACGAGGCTGTTCTGCAGAACGAGTTTGAGGACCCTGTCAAGTGCTTCGTTAGAGGCGTGCAGATCTTTGATAACACGCCGCTTGGGTCGGTGCCGGAGGCCTTGAAGTTGAAGCTCTTGGATAGCATGAGCAACACCCTTGGGATGAAGATCACTTCGTCCACGTGCTTGACCACTGGTGCTGACATTTTGCAGCAGAATGGAGTCACGGATTTGAGCAAGTGGAACTGCTTGTGGGTCACTGTGGCTTGGGGTTTCTTGTTCAGGTTTCTATTCTACTTGTCCTTGTTGGTGGGAAGCAAGAACAAGAGGAGGTGA 2292 0.5271 MSSRVVADNALPVTNTTPYFGMTELDDYTRRSAAIGGSPTLGQLLKHVGDVRKEVVGDGSETPVHQALEIGDDGVGIEPRSLPFVLSFNNLTYSVKVRRKLTFSAILPRRRSRLGAAADSEAPAVGDRMFSRTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKGRLKGTVALNGEALDSRLLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKARVQALIDQLGIRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPIILFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPAQLPSFFAEFGHPIPDAENRTEFALDLIRDLEGSPGGTKSLVEFNKSWQSMKHPAPAAHSNNTVNDQNGMSLKEAISASISRGKLVSGASATNTNSSNPSSMVPTFANPIWMEMATLSKRSFLNSRRMPELFGIRLGAVMVTGFILATMFWKLDNSPKGVQERLGFFAFAMSTTFYTTADALPVFLQERYIFMRETAYNAYRRSSYLVSHALVSLPSLLFLSLAFSSITFWAVGLDGGISGFLFYFLIIFASFWAGNSFVTFLSGVVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPSYWIWFHYMSLVKYPYEAVLQNEFEDPVKCFVRGVQIFDNTPLGSVPEALKLKLLDSMSNTLGMKITSSTCLTTGADILQQNGVTDLSKWNCLWVTVAWGFLFRFLFYLSLLVGSKNKRR* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3779 763 ProSitePatterns ABC transporters family signature. 261 275 IPR017871 GO:0005524
Amo19g3779 763 Pfam ABC transporter 137 289 IPR003439 GO:0005524
Amo19g3779 763 Pfam ABC-2 type transporter 460 667 IPR013525 GO:0016020|GO:0140359
Amo19g3779 763 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 133 352 IPR027417 -
Amo19g3779 763 Pfam ABC-2 type transporter 318 378 IPR043926 GO:0140359
Amo19g3779 763 PANTHER ABC TRANSPORTER G FAMILY MEMBER 16 32 756 - -
Amo19g3779 763 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 32 756 - -
Amo19g3779 763 SMART AAA_5 146 338 IPR003593 -
Amo19g3779 763 Gene3D - 128 352 IPR027417 -
Amo19g3779 763 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 120 361 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3779 Amo-Chr19 153474818 153477730 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3779 136 321 Calmodulin-binding Proteins AT2G36910 30.688 2.81e-11 65.5