Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3771 ATGTGGATTTTAGGTGCAGATAAGAGTGTTATTACTATCATGTCTCTCCGCATCTTATGTTTATTACTACTATTGAAAGTAAATGCAAAAGAAGAATCATATGAATCTGATGATAGAGTCATAAATCTTCCTGGCCAGCCTTCAAGCCCATCAGTTTCACACTTCTCAGGTTATATCACTGTCAATGAAGATCATGGGAGGGCCCTCTTCTACTGGTTCTTTGAAGCTCAATCTGAACCTTCCAATAAGCCCCTCCTTCTTTGGCTCAATGGAGGACCTGGATGCTCCTCCATTGGTTATGGTGCAGTTGTTGAGGTAGGACCTCTTATCATCAACCAAAATGGTGATGGTCTGCATTTCAACCCATATTCTTGGTATCAAGAAGCAAATTTGTTATTTGTGGAGTCCCCTGTTGGAGTTGGTTTTTCTTACAGCAATACAACTTCTGATTATCTCACCATTTTAGAGGATAATCTTGTGGCTGAGGATTCCTACAATTTCTTGGTGAATTGGCTGCAACAATTCCCACAATTCAAATCCAGGGACTTTTTCATAGCTGGAGAAAGCTATGGTGGGCACTATATCCCCCAACTCGCAGAGCTAGTCTTCGATCGAAACAAAGATAAAAGCAAATACCCTTTTATTAATCTTAAAGGTTTTATTGTAGGGAATCCAAAAACTGATGATTACTATGATAATAAAGGCCTTGTGGAATATGCATGGAGCCATGCAGTTATATCAGACCAACAATATGACAAAGCAAAACAAGTTTGTGATTTTAAGAAATCTGAATGGTCTAATGAATGTAACATTGCCATGAATGAAATCTTCACAGATTACTCAGAGATTGACATATACAACATTTATGCTCCGTCGTGTCGTCTTAATAACTCATTTAACAATAATCATAGCCGGGAACCACTCACAAAGATGATGAGAATTGGAAATAATAATTATAAAGTAAAGAGGATGAGAATTTATTTTGAAGGCTATGATCCATGCTATTCCACATATGCAGAGGAATATTTCAATAGGGTGGATGTTCAATCATCTTTTCATGCAAATATTAGAGGAGGAAATACTAATAAGGCAGCATGGAAAGTTTGCAATGATTCCATATTGAAGAGTTACAATTTCTCTGTATTTTCGGTCCTACCAATCTACACAAAACTCATCAAAGGTGGCCTTAAAATATGGATTTACAGTGGAGACACAGATGGGAGAATACCAGTGATAGGGACACGGTATTGGGTTGAAGCTCTGGGATTATCTCTGAAGTCTAGTTGGCAGAATTGGTACCATGACAATCAGGTTGGTGGAAGGATAGTGGAATATGAAGGGCTAACATACGTGACAGTGAGAGGGGCAGGTCACTTGGTACCATTAAACAAACCAAGTGAGGCTCTCTCCCTCATTCATTCTTTCCTTTCAGGCCAACATCTTCCTACTCATCACAAATAA 1461 0.386 MWILGADKSVITIMSLRILCLLLLLKVNAKEESYESDDRVINLPGQPSSPSVSHFSGYITVNEDHGRALFYWFFEAQSEPSNKPLLLWLNGGPGCSSIGYGAVVEVGPLIINQNGDGLHFNPYSWYQEANLLFVESPVGVGFSYSNTTSDYLTILEDNLVAEDSYNFLVNWLQQFPQFKSRDFFIAGESYGGHYIPQLAELVFDRNKDKSKYPFINLKGFIVGNPKTDDYYDNKGLVEYAWSHAVISDQQYDKAKQVCDFKKSEWSNECNIAMNEIFTDYSEIDIYNIYAPSCRLNNSFNNNHSREPLTKMMRIGNNNYKVKRMRIYFEGYDPCYSTYAEEYFNRVDVQSSFHANIRGGNTNKAAWKVCNDSILKSYNFSVFSVLPIYTKLIKGGLKIWIYSGDTDGRIPVIGTRYWVEALGLSLKSSWQNWYHDNQVGGRIVEYEGLTYVTVRGAGHLVPLNKPSEALSLIHSFLSGQHLPTHHK* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3771 486 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 13 483 IPR001563 GO:0004185|GO:0006508
Amo19g3771 486 Pfam Serine carboxypeptidase 44 478 IPR001563 GO:0004185|GO:0006508
Amo19g3771 486 Gene3D - 334 373 - -
Amo19g3771 486 ProSitePatterns Serine carboxypeptidases, serine active site. 185 192 IPR018202 GO:0004185
Amo19g3771 486 Gene3D - 384 478 - -
Amo19g3771 486 ProSitePatterns Serine carboxypeptidases, histidine active site. 448 465 IPR033124 GO:0004185
Amo19g3771 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 133 IPR001563 GO:0004185|GO:0006508
Amo19g3771 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 144 IPR001563 GO:0004185|GO:0006508
Amo19g3771 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 196 IPR001563 GO:0004185|GO:0006508
Amo19g3771 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 448 461 IPR001563 GO:0004185|GO:0006508
Amo19g3771 486 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 26 13 483 - -
Amo19g3771 486 Gene3D alpha/beta hydrolase 32 304 IPR029058 -
Amo19g3771 486 SUPERFAMILY alpha/beta-Hydrolases 36 482 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3771 Amo-Chr19 153324318 153327855 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3771 355 481 Calmodulin-binding Proteins AT2G22960 32.031 4.09e-15 72.0