Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3762 ATGCCGGAGCTTCGTAGTGGAGTGCGACGTGGTCGCGCTGCGGTAGGCCAAAAGGGCTCGGAACCACCGGCACCGGCAAGGAGGAACGTGAAGACACGCGCTCCTGCTGCGGCGGCGGGGGTTAAGGGTAGGCCCAAGACAAAGGCGGCGGCAGCGGCGAAGAAGCCGGTGATCGTTACATCGGAAGCGAAGGCGAAAGAGGTTAAAGAAAAGGTTTTCGGCGTGATGGGTGATGATAGTGGTGGCTTGAGCGCCAACAAGGGTGCTGCACCCGAAGATAACACTCCCCCTTTTCCTGAGAGGGTTCAAGTTGGAGGATCACCTATGTACAAGGTTGACAGGAAACTGGGTAAAGGTGGATTTGGTCAGGTTTTTGTTGGCCGTCGTGAGCGTGCAACAGGCCCTGGAGCTGCCGAGGTGGCTCTGAAATTCGAACATAGGAACAGTAAAGGCTGTAACTATGGCCCTCCATATGAGTGGCAAGTTTACAACATCCTTGGTGGTAGTCATGGAATACCTAGGGTACACTACAAAGGAAGACAAGGAGAATATTACATAATGGTTATGGACATGCTTGGTCCGAGTTTGTGGGATGTCTGGAATTCCTCAAGCCAGACGATGTCTGCTGAAATGGTTTCATGCATAGCTGTTGAATCCTTATCAATACTCGAGAAGATGCATTCGAAAGGCTATGTGCATGGAGATGTAAAACCAGAGAACTTCTTACTAGGTCAGCCATCTACAGCACAAGAGAAGAAACTGTTTCTGGTAGACCTTGGATTAGCAACAAAGTGGCGAGACACCTCAAGTGGGATGCATGTTGATTATGATCAGCGTCCTGACATGTTTAGAGGGACTGTCCGATATGCTAGTGTTCATGCTCATTTGGGAAGAACTGCAAGTAGAAGGGATGATCTTGAATCTCTTGCATACACACTCATCTTCCTTCATAAAGGCCGGTTACCATGGCAAGGTTATCAGGGTGATACCAAGTCCTTCCTCGTTTGCAAAAAGAAGATGGGGACATCGCCTGAGATGCTTTGCTGCTTTTGCCCTGCTCCATTTAGGCACTTTCTTGAGGTTGTAGTGAACATGAAATTTGATGAAGAACCCAACTATTCCAAGTTAATATCACTGTTTAATGGAATACTTGACCCGAATCCAGCATTGCGGCCACTTAATACTGACGGTGCTCAGAAGGTTGGACAAAAGCGGGGTAGACTGAATATGGAGGAAGAGGATGATTCACAGCCAAAGAAGAAGGTTCGATTAGGGGTTCCTGCTACACAATGGATTTCAGTTTACAATGCAAGACTGCCCATGAAACAAAGGTATCATTACAATGTGGCTGATGCAAGACTAGCACAGCATGTTGAGAGAGGAATTGCAGATGGCCTTCTTATTAGTTGTGTATCATCGTGTTCCAATCTCTGGGCACTTATTATGGATGCTGGAACTGGATTTACAAATCAAGTCTATAAGTTGTCACCCTTTTTCTTGCACAAGGAATGGATCATGGAGCAGTGGGATAAGAATTATTACATCACTTCTATTGCAGGGGGAAATAATGGAACCTCTCTTGTGGTGATGTCAAAAGGTACACAGTATACTCAACAATCATACAAAGTAAGTGATTCTTTCCCCTTCAAATGGATAAACAAGAAGTGGAAAGAAGGTTTTCATGTTACATCAATGGCTACTGCTGGAAGTCGCTGGGGTGTTGTTATGTCTCGCAATGCTGGATTCAGTGATCAGGTGGTTGAACTTGATTTTCTCTATCCAAGTGAGGGTATCCATCGACGTTGGGACGGTGGTTATAGAATTACCGCAACTGCTGCTACATTGGACCAATCTGCTCTAATATTAAGTATTCCGAGGCGCAAGCCAGGAGATGAAACTCAGGAAATTCTACGGACATCTCAATTTCCCAGCACACATGTTAAGGAGAAATGGTCAAAGAATCTTTATCTTGCTTGTTTGTGCTATGGGCTTATACAGATTCTTGTTTCGTTTCTTCCCTTCTATTCTAAAGCTCGACTTTGGTGGAGGGTATTTTTTTGGGGAAAGAAGAGTAGGAAGAACAAAGATAGAGGCTTTGATAGTTTGAAGGAGCTCGGAAGGGATGTTGAGGATGGCGGAGTAGCGAATCCTTCGGGCAGGAGTGTCGTGGGAGGGGAAGATAGAGCGCGCGTGGATGGCTTGGCACTGAGTGTAGACGTAAGGGTGGGTTTTGTTGCAGGTTTGTGGAGGGAGGAGCCATTGGAGTGCGGAGGAGGAAGGGGAGGTGGAGAAGGTGAGGATGAAGGAAGAGCGTGGATGGTGGAGGAGGGGAAGTCGAAGTACAGAGTTAAAGCTATGTCAGTGTTAGACATTTTTTCTTGGCGGGTTGAATCCTGGATTTGGAACAAATTTCAAGAAGGAGGCCAGTTTTTCAGAGGTTGCTGCACTAGCTCCCTGAATATAACTAAGTGTGTTGATAGGTATACTACGGTGCAATTACACAAAAAAATAAAAACAATCAAACAAAATAGTACTTACCCGATAACTGCCAAGACCTGCAGCTACATGTTTGGTTTCCCAAATCAACCACCACATTATGTGGTTCACCATGCACTTCAAACATCACTTCAGCCGCATCTCCAGACCACATTGGTAGCTTCAAGAACCACTTCCAGTTGTCTTTGTTACACATAA 2694 0.4595 MPELRSGVRRGRAAVGQKGSEPPAPARRNVKTRAPAAAAGVKGRPKTKAAAAAKKPVIVTSEAKAKEVKEKVFGVMGDDSGGLSANKGAAPEDNTPPFPERVQVGGSPMYKVDRKLGKGGFGQVFVGRRERATGPGAAEVALKFEHRNSKGCNYGPPYEWQVYNILGGSHGIPRVHYKGRQGEYYIMVMDMLGPSLWDVWNSSSQTMSAEMVSCIAVESLSILEKMHSKGYVHGDVKPENFLLGQPSTAQEKKLFLVDLGLATKWRDTSSGMHVDYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHKGRLPWQGYQGDTKSFLVCKKKMGTSPEMLCCFCPAPFRHFLEVVVNMKFDEEPNYSKLISLFNGILDPNPALRPLNTDGAQKVGQKRGRLNMEEEDDSQPKKKVRLGVPATQWISVYNARLPMKQRYHYNVADARLAQHVERGIADGLLISCVSSCSNLWALIMDAGTGFTNQVYKLSPFFLHKEWIMEQWDKNYYITSIAGGNNGTSLVVMSKGTQYTQQSYKVSDSFPFKWINKKWKEGFHVTSMATAGSRWGVVMSRNAGFSDQVVELDFLYPSEGIHRRWDGGYRITATAATLDQSALILSIPRRKPGDETQEILRTSQFPSTHVKEKWSKNLYLACLCYGLIQILVSFLPFYSKARLWWRVFFWGKKSRKNKDRGFDSLKELGRDVEDGGVANPSGRSVVGGEDRARVDGLALSVDVRVGFVAGLWREEPLECGGGRGGGEGEDEGRAWMVEEGKSKYRVKAMSVLDIFSWRVESWIWNKFQEGGQFFRGCCTSSLNITKCVDRYTTVQLHKKIKTIKQNSTYPITAKTCSYMFGFPNQPPHYVVHHALQTSLQPHLQTTLVASRTTSSCLCYT* 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3762 897 PANTHER CASEIN KINASE I-LIKE PROTEIN 69 641 - -
Amo19g3762 897 MobiDBLite consensus disorder prediction 78 105 - -
Amo19g3762 897 MobiDBLite consensus disorder prediction 1 48 - -
Amo19g3762 897 Gene3D Transferase(Phosphotransferase) domain 1 89 427 - -
Amo19g3762 897 CDD STKc_CK1 109 380 - -
Amo19g3762 897 ProSitePatterns Protein kinases ATP-binding region signature. 116 143 IPR017441 GO:0005524
Amo19g3762 897 SUPERFAMILY Protein kinase-like (PK-like) 110 392 IPR011009 -
Amo19g3762 897 Pfam Protein kinase domain 110 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g3762 897 MobiDBLite consensus disorder prediction 405 420 - -
Amo19g3762 897 MobiDBLite consensus disorder prediction 394 420 - -
Amo19g3762 897 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Amo19g3762 897 SMART serkin_6 110 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g3762 897 ProSiteProfiles Protein kinase domain profile. 110 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g3762 897 PANTHER CASEIN KINASE-RELATED 69 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3762 Amo-Chr19 153189057 153200837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3762 112 380 MAP Kinase Kinase Kinase AT5G50180 22.695 1.64e-06 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Amo19g3762 Pkinase 2.8e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3762 - - gmx:100819969 1172.92