Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3760 ATGGCTATACCCACACCCATTCCCACTCGTGTGTTTTCTGGATTTGGCACTATAACACCAGAGCCTCACTTCACTTGCATTGCAATCAAATTCTCAAGCACAAGCACTCCTTTCCCTTTTGGGTTTTCACCCAATAAGCTTCAGCTTCGGCCACTACTTAACACCACAAGAAATTTTTGTGCTGTGGCAACTGGGGTGCAAGAAGTTCTTCCAACACCCCTTACTTCAACTTCGCCCCCACCTTCCATGGTTGATGGAGCTACAAGGTTGTATATCTCCTACACCTGTCCGTATGCACAACGTGTATGGATCACTCGTAACTGTAAGGGATTGCAGGACAAGATACAATTGGTTCCTATTGATTTAAAAGATAGACCTTCCTGGTATAAGGACAAAGTCTACCCACCCAACAAGGTTCCAGCTTTGGAACACAAAAATGAAGTCAGGGGAGAAAGTCTTGATCTGATTAAATATATTGATAGTCACTTTGAAGGGCCCTCTCTTTCCCCTAGTAGTGGTCCTGCTATGGAGTTTGCTGAAGAGTTGCTATCTTACACTGACACATTTTATAAGACTGTTGTTTCTTCATTTAAAGGAGATGATGTGACAGAAGCTTGCACTGCATTTGATTACATTGAAACTGTTCTCTCCAAATATGACGATGGACCTTTCTTCCTTGGCCAATTCAGTCTTGTGGATATAGCATATGCTCCTTTCATTGAAAGATTTCAGCTATTTCTTATGGATGTTAAGAATTATGATATTGGCTTTGGCAGGCCTAATCTAGCGGCATGGATGGAGGCAATGAACAACATTGATGGCTACAAAATAACTCGCTCTAATCCCAAGGAGCTTGTTGAAAGTTACAAGAGACGCTTCCTGGCCAATATATGA 894 0.4217 MAIPTPIPTRVFSGFGTITPEPHFTCIAIKFSSTSTPFPFGFSPNKLQLRPLLNTTRNFCAVATGVQEVLPTPLTSTSPPPSMVDGATRLYISYTCPYAQRVWITRNCKGLQDKIQLVPIDLKDRPSWYKDKVYPPNKVPALEHKNEVRGESLDLIKYIDSHFEGPSLSPSSGPAMEFAEELLSYTDTFYKTVVSSFKGDDVTEACTAFDYIETVLSKYDDGPFFLGQFSLVDIAYAPFIERFQLFLMDVKNYDIGFGRPNLAAWMEAMNNIDGYKITRSNPKELVESYKRRFLANI* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3760 297 Gene3D - 165 297 - -
Amo19g3760 297 SUPERFAMILY GST C-terminal domain-like 163 293 IPR036282 -
Amo19g3760 297 Pfam Glutathione S-transferase, N-terminal domain 90 166 IPR004045 -
Amo19g3760 297 PANTHER GLUTATHIONE S-TRANSFERASE L2, CHLOROPLASTIC 56 294 - -
Amo19g3760 297 Pfam Glutathione S-transferase, C-terminal domain 208 268 - -
Amo19g3760 297 CDD GST_C_Lambda 177 290 - -
Amo19g3760 297 Gene3D Glutaredoxin 61 164 - -
Amo19g3760 297 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 86 167 IPR004045 -
Amo19g3760 297 PANTHER GLUTATHIONE S-TRANSFERASE L1 56 294 IPR044629 GO:0004364
Amo19g3760 297 SUPERFAMILY Thioredoxin-like 80 168 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3760 Amo-Chr19 153173703 153175958 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3760 74 295 Glutathione S-transferase Gene Family AT3G55040 66.216 9.99e-107 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3760 K00799 - ming:122093307 352.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g3760 19 153173703 153175958 Amo16g1723 16 34642955 34645589 ECH
Amo19g3760 19 153173703 153175958 Amo19g3760 19 153173703 153175958 ECH